Pairwise Alignments

Query, 321 a.a., sialic acid-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 339 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Pseudomonas fluorescens FW300-N2E2

 Score =  151 bits (381), Expect = 2e-41
 Identities = 96/297 (32%), Positives = 151/297 (50%), Gaps = 4/297 (1%)

Query: 25  TLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLALYPSAQLGDDRAMLQQLTLGDLDI 84
           TL+   Q      +   A+  AD L E S G+IK+ L+P   LG D   +  L  G LDI
Sbjct: 33  TLRFAFQNVKEHPQGQGAQKFADLLSEKSGGKIKVRLFPGGTLGGDVQTVSALQGGTLDI 92

Query: 85  TYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFESDFGQGVRDEMLQKFNWRALDTWYN 144
           T    G +    P    +  P++  + +    + +   GQ +  ++  K    AL  W  
Sbjct: 93  TVLNSGILAAQAPDYAMLDFPFLFNNVEEAHAVIDGPVGQKLAVQLDSK-GLVALGYWDL 151

Query: 145 GTRE-TTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKLSGASPTPMSFSEVYLALQTNAVD 203
           G R  T S  P+  +ED +GLK+RV  +   L      GA+P PM+F EVY  L+ + +D
Sbjct: 152 GFRNLTNSKHPVTKLEDMQGLKIRVIQSPIYLETFSALGANPVPMAFPEVYTGLEQHTID 211

Query: 204 GQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISESTWQKLSDTDKDIIQKAVQKVGD 263
           GQENP   I+  KFYEVQK L++T HI N Q +IIS+ TW +L+D +K +I+ A  +   
Sbjct: 212 GQENPFTVIEGNKFYEVQKYLSVTGHIFNPQSLIISQKTWNRLNDDEKAMIRSAATEAQK 271

Query: 264 AHTQ-TVKTQEAELVSFFKSEGIN-VTYPDLEPFREAMQPLYKEFDSNIGQPIVSKL 318
              + T  + +   V+   +  +N VT  + + FRE ++P+  +F  ++   +V  +
Sbjct: 272 FQREVTAASMDKAKVTLAGAMTVNEVTPAEKDRFRERVKPVVDKFAKSLDADLVKTM 328