Pairwise Alignments

Query, 321 a.a., sialic acid-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., periplasmic binding protein from Sinorhizobium meliloti 1021

 Score =  151 bits (381), Expect = 2e-41
 Identities = 92/301 (30%), Positives = 155/301 (51%), Gaps = 4/301 (1%)

Query: 7   ITIAILTLSAAASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLALYPSAQ 66
           +T A+L+L A  +  AA T ++   A+ G+ +  ++   A+ +E+ S+G +K+ +  SAQ
Sbjct: 7   LTAAVLSLCAGPA--AAQTYQLSHNAAAGNPKDVASLKFAELVEQKSEGRLKIDVGGSAQ 64

Query: 67  LGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFESDFGQGV 126
            GDD   +  + LG +  +    G     +P    + LP++ +D      + +   G  +
Sbjct: 65  FGDDAETITNMRLGTIAFSANSQGTTSAVVPEIALLGLPFLFQDLKQAEAVMDGPVGDKI 124

Query: 127 RDEMLQKFNWRALDTWYNGTRETT-SNRPLNSIEDFKGLKLRVPNAKQNLNYAKLSGASP 185
                Q+     L  W NG RET+ S R + +  D  G+K+R P  +  ++     GASP
Sbjct: 125 AAAAEQQ-GLVVLAWWNNGIRETSNSKRQITAPSDLAGMKIRTPPDQMTVDIFTALGASP 183

Query: 186 TPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISESTWQK 245
           TPM+FSE+Y+ALQ   VDGQENPL  I + K +EVQ  ++MT+H       + S+  +  
Sbjct: 184 TPMAFSELYIALQQGVVDGQENPLINIHSSKLHEVQPYISMTNHKYESTPFLASKIVFDA 243

Query: 246 LSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQPLYKE 305
           L   D+ II+ A ++ G  + Q V  Q   L    ++ G+ +   D  PF +A Q +Y +
Sbjct: 244 LLPEDQQIIRDAAREAGQLNRQMVGEQTTRLRGELEAAGVKINDVDPAPFVQATQSVYDK 303

Query: 306 F 306
           +
Sbjct: 304 W 304