Pairwise Alignments

Query, 321 a.a., sialic acid-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., periplasmic binding protein from Sinorhizobium meliloti 1021

 Score =  142 bits (359), Expect = 9e-39
 Identities = 90/273 (32%), Positives = 142/273 (52%), Gaps = 5/273 (1%)

Query: 43  KMLADTLEEMSQGEIKLALYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAV 102
           K  AD + E + G +K+ ++PS+QLG+D   L QL  G  +        +   +P A   
Sbjct: 49  KEAADKILEETGGRLKINIFPSSQLGNDTETLSQLRNGATEFFSLSPLILSTLVPNAAIS 108

Query: 103 MLPYVAKDFDHLRRMFESDFGQGVRDEMLQKFNWRALDTWYNGTRE-TTSNRPLNSIEDF 161
            + +   D+D + +  + + G   R E+ +K        W NG R+ T+SN+P+N+ ED 
Sbjct: 109 GIGFAFPDYDTVWKAMDGELGAYARGEIEKKGLVPMEKIWDNGFRQITSSNKPINTPEDL 168

Query: 162 KGLKLRVPNAKQNLNYAKLSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQ 221
           KG K+RVP +    +     GA+PT ++F+EVY AL T  VDGQENPL    T K YEVQ
Sbjct: 169 KGFKIRVPPSPLWQSMFTAFGAAPTTINFAEVYTALSTGTVDGQENPLAIASTAKLYEVQ 228

Query: 222 KNLAMTHHIVNDQMVIISESTWQKLSDTDKDIIQKAVQKVGDA-HTQTVKTQEAELVSFF 280
           K+ AMT+H+ +   ++ ++  W+ L +  ++I  K + +   A  T T K  +       
Sbjct: 229 KHCAMTNHMWDGFWMLANKQAWETLPEDIREIAAKHLNESAIAQRTDTAKVNDTVREQLT 288

Query: 281 KSEGINVTYPDLEPFREAMQP--LYKEFDSNIG 311
           +S G+  T PD   FRE ++    Y E+    G
Sbjct: 289 QS-GMTFTDPDKAAFRETLRSAGFYAEWKGKFG 320