Pairwise Alignments

Query, 321 a.a., sialic acid-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  117 bits (294), Expect = 3e-31
 Identities = 79/298 (26%), Positives = 136/298 (45%), Gaps = 6/298 (2%)

Query: 6   KITIAILTLSAAASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLALYPSA 65
           ++  A+L  +  A   +AT L+     + G ++   A   A+ +   + GE+ + +YP++
Sbjct: 9   RVAGAMLGAALLAGAASATELRYAHVGAEGDIQTVYAAQAAEGIAAATGGEVTVTVYPAS 68

Query: 66  QLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFESDFGQG 125
           QLG    M+  + +G + + + +F  +   +P       P++ +D  H     +      
Sbjct: 69  QLGGVAEMVDGVRMGSISMGHHDFASLARLVPEVAVFNAPFIYRDGAHALAATDPQSSPA 128

Query: 126 VR--DEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKLSGA 183
           ++  +E L     R +   Y G R  +SN P+ +  D  G   R    +  ++  K  GA
Sbjct: 129 LQAINEKLIAQGVRIVGRIYRGDRHISSNFPVKTPADLAGKPFRAVPLELWVSMVKGFGA 188

Query: 184 SPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISESTW 243
            PTP+  +E+  AL T  V GQENPL  I +    EVQ +L+MT H+     V I+E  W
Sbjct: 189 IPTPVEVAELPTALMTGVVVGQENPLTRIASNNLNEVQSHLSMTGHMRAVLAVFINEEVW 248

Query: 244 QKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYP----DLEPFRE 297
           Q LS+  +  + K + +      +     EA+LV   K  G+ V       D+  FRE
Sbjct: 249 QGLSEEQRTALTKVLDEEAQKSLKMATESEADLVKELKGRGMTVITEAEGLDVAAFRE 306