Pairwise Alignments

Query, 321 a.a., sialic acid-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 352 a.a., putative TRAP transporter extracellular solute binding protein, family 7 from Phaeobacter inhibens DSM 17395

 Score = 80.9 bits (198), Expect = 4e-20
 Identities = 76/326 (23%), Positives = 142/326 (43%), Gaps = 14/326 (4%)

Query: 8   TIAILTLSAAASVNAATT---LKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLALYPS 64
           T+A+  L A  +++A      ++    ++    +Y+   +  + +E  S G I++ L+  
Sbjct: 8   TVALSALMAGTALSAYAADYKIRATANSNENDEDYDGLVVFKNYVEAASNGAIEVELFIG 67

Query: 65  AQLGDDRA-MLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFESDFG 123
            QL  + A  LQ +  G +D+  +  G      P  + + LPY+  D      +   DF 
Sbjct: 68  TQLCSNGAECLQGVADGSIDVYISTSGGASGLFPYVQVLDLPYLMADDRIAEHVLSGDFT 127

Query: 124 QGVRDEMLQKF--NWRALDTWYNGTRETTSNRPLNSIE--DFKGLKLRVPNAKQNLNYAK 179
           + +R   L+    + R +     G     +N      E  D +GLK+R   A       K
Sbjct: 128 RAMRQMALEDSGDSIRLMTIGNTGGWRNFANTKRRVAEPADMEGLKIRTVVADLPQELVK 187

Query: 180 LSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEV-QKNLAMTHHIVNDQMVII 238
             GASPTP+ + E++ + QT  V+G +N +  I  MKF +   + + +  H     +  +
Sbjct: 188 ALGASPTPIPWPELFTSFQTGVVEGSKNGITDIMGMKFPDAGLQYVTLDGHAYMGALWWM 247

Query: 239 SESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEG--INVTYPDLE-PF 295
           S  T+  + +  + ++      +  A   + K +  +    F + G  + V  PD +  F
Sbjct: 248 SNKTFMDMPEDMRQVVVDGFYALQQATFASPKRKSIQAYEDFVAGGGDLYVPTPDQKAAF 307

Query: 296 REAMQPLYKEFDSNI--GQPIVSKLA 319
           + A +P+Y  F SN+  G  I + LA
Sbjct: 308 KSAAEPVYDWFKSNVTRGDEIFTALA 333