Pairwise Alignments

Query, 321 a.a., sialic acid-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., C4-dicarboxylate ABC transporter from Herbaspirillum seropedicae SmR1

 Score =  125 bits (314), Expect = 1e-33
 Identities = 88/322 (27%), Positives = 164/322 (50%), Gaps = 16/322 (4%)

Query: 6   KITIAILTLSAAASVNAAT----TLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLAL 61
           K  +  +T +A  S NA       +K     +  + +  +A+   +  E+ ++G +K+ +
Sbjct: 4   KSILLAMTAAAIVSTNAFAQQPIVIKFSHVVANDTPKGKAAERFKELAEKATKGRVKIEV 63

Query: 62  YPSAQLGDDRAMLQQLTLGDLDI---TYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMF 118
           YP++ L  D+  L+ L LG + +   + A+FG +G  +   E   LPY+    + L R+ 
Sbjct: 64  YPNSTLYKDKEELEALQLGAVQMLAPSLAKFGPLG--VKEFEVFDLPYIFPTKEVLYRVT 121

Query: 119 ESDFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYA 178
           E   G+ +  ++  K     L  W NG +  ++N+PL+   DF+GLK+R+ ++K      
Sbjct: 122 EGPIGKDLFKKLEPK-GITGLAYWDNGFKVMSANKPLHHPADFRGLKMRIQSSKVLDAQM 180

Query: 179 KLSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVII 238
           +  GA+P  ++FSEVY ALQT  VDG ENP   + T K +EVQK++ +++H      VI+
Sbjct: 181 RALGANPQVLAFSEVYQALQTGVVDGTENPPSNLYTQKMHEVQKHVTVSNHGYLGYAVIV 240

Query: 239 SESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQE-----AELVSFFKSEGINVTYPDLE 293
           ++  W  L    +  ++ A+ K    +   +  QE     A +    K+    +T  +  
Sbjct: 241 NKKFWDGLPSDIRTQLEGAM-KDATKYANAIAQQENDAALAAVEKTGKTTVYRLTDAEKA 299

Query: 294 PFREAMQPLYKEFDSNIGQPIV 315
            +R+A+ P+ ++  S IG+ ++
Sbjct: 300 EWRKALLPVQQQMASRIGKDLI 321