Pairwise Alignments

Query, 321 a.a., sialic acid-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., TRAP dicarboxylate family transporter (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  128 bits (322), Expect = 2e-34
 Identities = 82/294 (27%), Positives = 149/294 (50%), Gaps = 4/294 (1%)

Query: 11  ILTLSAAASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLALYPSAQLGDD 70
           ++ ++    V+AA  + + +    GS +Y  A+  A  L E S     + L+ SA LG +
Sbjct: 25  LMLVALPPHVSAAEDITLAVVTKPGSAQYVCAERFAQLLAERSDKRFNVVLHHSASLGTE 84

Query: 71  RAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFESDFGQGVRDEM 130
             +LQQ+ LG + +     G +  ++P   A+  P++  D     R+ +   G+G+ D  
Sbjct: 85  TDILQQVQLGAVQMAIVTTGTLDAFVPEMAALDFPFLFTDTTTADRVLDGPVGRGLLDR- 143

Query: 131 LQKFNWRALDTWYNGTRE-TTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKLSGASPTPMS 189
           L    ++ L    NG R  T S RP+ + +D +GLK+RV  ++ +    +  GA+PTPM 
Sbjct: 144 LSTAGFKGLHFSENGFRHLTNSIRPVMTPDDVRGLKIRVMESQVHRELWRTLGANPTPMG 203

Query: 190 FSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISESTWQKLSDT 249
           +  +Y  LQ   +DGQENPL  I   +  EVQK+L++T H+ +    + + + ++ L   
Sbjct: 204 W-PIYAELQQGTLDGQENPLWVIAEYRLNEVQKHLSLTGHVYSTHTDLANLAWFEALPAN 262

Query: 250 DKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINV-TYPDLEPFREAMQPL 302
           D+ ++   +Q          + ++A  +   ++ G+ V   PD+  FR+ +QPL
Sbjct: 263 DRRLLASCMQDAALWQRTWSRQRDAAYLEQLRTAGMQVIERPDIATFRQRVQPL 316