Pairwise Alignments

Query, 321 a.a., sialic acid-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 352 a.a., TRAP dicarboxylate transporter- DctP subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 78.6 bits (192), Expect = 2e-19
 Identities = 73/320 (22%), Positives = 139/320 (43%), Gaps = 10/320 (3%)

Query: 3   TINKITIAILTLSAAASVNAAT-TLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLAL 61
           T+  +    + LSA  +  A   TL+    ++    +Y+   +  + +E  S G I + L
Sbjct: 5   TLKALLAGAMLLSAPLAATAQEYTLRATANSNENDEDYDGLVVFKNYVESASNGAIAVEL 64

Query: 62  YPSAQLGDDRA-MLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFES 120
           +   QL  + A  LQ +  G +DI  +  G      P  + + LPY+  D      +   
Sbjct: 65  FIGTQLCSNGAECLQGVADGSIDIYISTSGGASGIFPYVQVLDLPYLMADDRIAEAVLAG 124

Query: 121 DFGQGVRDEMLQKFNW--RALDTWYNGTRETTSN--RPLNSIEDFKGLKLRVPNAKQNLN 176
           DF + VR+  L+      R +     G     +N  R + +  D +GLK+R   A     
Sbjct: 125 DFTRKVREMALEDSGGMIRLMTIGNTGGWRNFANTQRRIAAPSDMEGLKIRTVVADLPQE 184

Query: 177 YAKLSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEV-QKNLAMTHHIVNDQM 235
             ++ GA+PTP+ + E++ +LQT  V+G +N +  I  MKF +   + L +  H     +
Sbjct: 185 LVRVLGAAPTPIPWPELFTSLQTGVVEGSKNGITDIMGMKFPDAGLQYLTLDGHAYMGAL 244

Query: 236 VIISESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLE-- 293
             ++   +  + +  + ++      +  A   + K +       F + G ++  P  E  
Sbjct: 245 WWMNNERFLSMPEDLRRVVVDGFYALQQATFASPKRKSIPAYEEFVAGGGDLYVPTPEEK 304

Query: 294 -PFREAMQPLYKEFDSNIGQ 312
             F+EA  P++  F +N+G+
Sbjct: 305 AAFKEAAAPVFDWFKANVGR 324