Pairwise Alignments

Query, 173 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 175 a.a., TRAP-type C4-dicarboxylate transport system, small permease component from Pseudomonas stutzeri RCH2

 Score = 54.7 bits (130), Expect = 8e-13
 Identities = 38/162 (23%), Positives = 77/162 (47%), Gaps = 15/162 (9%)

Query: 16  IITVPLMAALLAVLTWQIGTRWLLNDPSLWSEELARLLFMYMCLVGCAIAIKRSSHVNIT 75
           I+    +  +  ++ W + +R+ L     W E +A LL +    VG A + +  +H+ + 
Sbjct: 18  IVAATAIVIMATIIPWGVFSRYALGQGLGWPEPIAILLMVLFTFVGAAASYRAGAHMAVQ 77

Query: 76  FFSDKLPEKARLSLVLSLEIAVLVSIGAIIVLGYQ--HAQRNAFFELIT---LGISSSWM 130
             SD+LP  A+  ++L + +A+      +++ GY+   A  N +   +T   +GIS +  
Sbjct: 78  VLSDRLPPLAQPFIILFVRLAMAAISLFMLIWGYKLCVATWNQYLSTLTWMRVGISYA-- 135

Query: 131 NYSLPVGGVFMVFRQLEKIFNLMKLLLGVSSSASLIDQQVTE 172
              +P+GG   +      +F + +LL G  S   ++D +  E
Sbjct: 136 --PIPLGGFITL------LFVIEQLLYGDQSKRRVVDYEARE 169