Pairwise Alignments

Query, 173 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 175 a.a., Tripartite ATP-independent periplasmic transporter, DctQ component from Pseudomonas syringae pv. syringae B728a

 Score = 49.7 bits (117), Expect = 3e-11
 Identities = 34/128 (26%), Positives = 68/128 (53%), Gaps = 9/128 (7%)

Query: 28  VLTWQIGTRWLLNDPSLWSEELARLLFMYMCLVGCAIAIKRSSHVNITFFSDKLPEKARL 87
           ++ W I  R++L   S W E  A LL +     G A + +  +H+ ++   D++P++ R 
Sbjct: 30  IIPWGIFARYILGSGSSWPEPTAILLMVVFTFFGAAASYRAGAHMAVSMAVDRMPQQVR- 88

Query: 88  SLVLSLEIAVLVSIGAIIVL--GYQHAQR--NAFF-ELITLGISSSWMNYSLPVGGVFMV 142
             V S+ + +L++I A+ ++  G++      N F  EL  L +  S++   +P+GG+  +
Sbjct: 89  -RVASVVVQILMAIVALFMIFKGFKLCATTWNQFVGELPFLRVGISYL--PIPIGGLVTL 145

Query: 143 FRQLEKIF 150
              LE++F
Sbjct: 146 VFVLERLF 153