Pairwise Alignments

Query, 173 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 170 a.a., TRAP transporter, subunit DctQ from Phaeobacter inhibens DSM 17395

 Score = 60.1 bits (144), Expect = 2e-14
 Identities = 37/147 (25%), Positives = 69/147 (46%), Gaps = 2/147 (1%)

Query: 3   LKMLRKIINNIEEIITVPLMAALLAVLTWQIGTRWLLNDPSLWSEELARLLFMYMCLVGC 62
           ++ LRKI  N E  + +     L+  +  ++  R L    S+W EE+ R  F+Y+  +G 
Sbjct: 1   MEFLRKIDKNAERWLLLTFYVMLVITMAVEVIRRELFAYSSIWGEEIVRYSFIYLAWIGA 60

Query: 63  AIAIKRSSHVNITFFSDKLPEKARLSLVLSLEIAVLVSIGAIIVLGYQHAQRNAFFELIT 122
           A A+K  +H+ I      L  + +  L +  ++ + V     +   ++    +A F  ++
Sbjct: 61  AAAVKERAHIRIDVLMHYLGPRPKALLYIFGDLVMFVVALVALYWSFETVLVSAKFGSVS 120

Query: 123 LG--ISSSWMNYSLPVGGVFMVFRQLE 147
            G  IS  W   ++P G   MV+R L+
Sbjct: 121 HGLRISMVWFLMAVPAGFALMVWRLLQ 147