Pairwise Alignments

Query, 173 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 188 a.a., TRAP transporter, DctQ family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 58.9 bits (141), Expect = 5e-14
 Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 8/132 (6%)

Query: 19  VPLMAALLAVLTWQIGTRWLLNDPSLWSEELARLLFMYMCLVGCAIAIKRSSHVNITFFS 78
           +  MA +  ++  Q+ +R+ LN+   WSEEL R+L + +  +GCA+A++  +H  +    
Sbjct: 27  ITAMAGMAVLVAVQVFSRYALNESLFWSEELGRILLVQLTFIGCAVAVRAGAHPGMDALV 86

Query: 79  DKLPEKARLSLVLSLEIAVLVSIGAIIVLGYQHAQRNAFF----ELITLGISSSWMNYSL 134
             LP + R        + VL++  A   L   H  R A+F        LG+S       L
Sbjct: 87  RHLPRRGR----HVTHMLVLLAALAFFALLAWHGARFAWFVRHQSTPALGLSRLIPALPL 142

Query: 135 PVGGVFMVFRQL 146
           PVGG   +   L
Sbjct: 143 PVGGALSMLHVL 154