Pairwise Alignments

Query, 173 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 166 a.a., C4-dicarboxylate transport system, small permease component from Caulobacter crescentus NA1000

 Score = 55.1 bits (131), Expect = 6e-13
 Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 2/129 (1%)

Query: 22  MAALLAVLTWQIGTRWLLNDPSLWSEELARLLFMYMCLVGCAIAIKRSSHVNITFFSDKL 81
           + A+  ++ W +  R+ L D   W+E+ A LL ++  L+  A+ ++   H+ ++  ++ +
Sbjct: 25  LIAMTGIIGWAVFARYSLGDAPAWAEQAALLLMVWFVLLAAAVGVREQFHLGMSAATNAM 84

Query: 82  PE-KARLSLVLSLEIAVLVSIGAIIVLGYQHAQRNAFFELITLGISSSWMNYSLPVGGVF 140
           P    RL  V+SL +A+     A+ V G +   R   F++ TLG+        LP+ G  
Sbjct: 85  PPFLRRLCRVVSL-LAMAAFGLAMGVWGGELVARTWAFDIPTLGVPRGAAYLPLPIAGWM 143

Query: 141 MVFRQLEKI 149
            VF  LE +
Sbjct: 144 SVFFALEHL 152