Pairwise Alignments

Query, 427 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 428 a.a., C4-dicarboxylate ABC transporter from Azospirillum brasilense Sp245

 Score =  241 bits (614), Expect = 4e-68
 Identities = 142/422 (33%), Positives = 234/422 (55%), Gaps = 5/422 (1%)

Query: 7   GWLGLLFAGMPVGFSLIFVALAFLILTNSTGINFAAQQMLGGIDNFTLLAVPFFVLTGHL 66
           G+  LL AG+P+G +L  +A A +I     GI      +  G+  + LLA+P FVLTG +
Sbjct: 9   GFFALLIAGVPIGAALA-LAGAVVIGVAGLGIMSLPTTVYTGMAKYPLLAIPMFVLTGLI 67

Query: 67  MNSAGITERIFNFAKSLVGHITGSLGHVNIMASLLFSGMSGSALADAGGLGQLEIKSMRD 126
              +G+ ER+  FA +++G   G+L  V I+ ++   G+SGS  A +  +G +   +M  
Sbjct: 68  FERSGVAERLVKFALAVIGKRQGALPAVAIIVAMFMGGISGSGPATSAAVGAVMTAAMLR 127

Query: 127 AKYHDDFAGGLTAASCIIGPLVPPSVPLVIYGV-VSNTSIGALFLAGAIPGLLCCIALMV 185
             Y   F   +  A+     L+PPS+  +IY V V   S+ ALF AG IPG+L  +AL++
Sbjct: 128 EGYPRAFTASVIGAAAATDILIPPSIAFIIYSVMVPQASVPALFAAGMIPGILAGLALVI 187

Query: 186 MSYFICKKRGYMTLPKA--SRREQFKSLKEAFLSLLTPVIIIGGIFSGKFTPTEAAAVSS 243
            + ++ ++ G+  + +   +R   +K+ KEA   L+ PV+I+GG+ +G FTPTEAA V++
Sbjct: 188 PAVWMSRRNGFGEVAREGETRPSIWKAFKEAIWGLMAPVVILGGMRAGLFTPTEAAVVAA 247

Query: 244 LYALFLGTVVYNTLTLQGFIEILKETVNTTAVVALMVMGVTVFGWIVAREQLPQMLADYF 303
           +Y LF+G  +Y TLTL+   ++L E+   +A++ ++V    VF W      +   +A   
Sbjct: 248 VYGLFVGFFIYRTLTLRMVYDVLVESAEISAIILMVVALAGVFAWATGTLGVIDPIARGI 307

Query: 304 LTISDNPLVLLLLINLLLLFLGTFIESLALLLLLVPFLVPVASAVGIDPVHFGVMAILNL 363
           + +      +L L+   L+ +G F++ ++  L+L+P LVP+A+    D V FGV+  + L
Sbjct: 308 VDLGIGQYGVLALLIAALVVIGMFLDGVSTFLILLPILVPIANHFNWDLVWFGVILTMKL 367

Query: 364 MIGILTPPMGMALYVVSRVGDIPFHTLTRGVLPLLVPLFIVLALVAVFPQFTLLLPELFL 423
            IG  +PPM + L V  ++         R V  L++ +F+ LA V VFP   L LP   L
Sbjct: 368 AIGQFSPPMAVNLMVTCKIAGTTMEATVRWVGWLILAMFLALAAVVVFPGLALWLPR-SL 426

Query: 424 GY 425
           GY
Sbjct: 427 GY 428