Pairwise Alignments

Query, 427 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 909 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  218 bits (554), Expect = 8e-61
 Identities = 127/419 (30%), Positives = 213/419 (50%), Gaps = 5/419 (1%)

Query: 11  LLFAGMPVGFSLIFVALAFLILTNSTGINFA-AQQMLGGIDNFTLLAVPFFVLTGHLMNS 69
           LL  GMP+ F+L   A A L + +  GI +     M  GI N   +++P FVL G  + S
Sbjct: 9   LLATGMPIAFALGLAAFAALYMQSGAGIFYVLGDTMFSGIANLAYVSIPMFVLMGAAVAS 68

Query: 70  AGITERIFNFAKSLVGHITGSLGHVNIMASLLFSGMSGSALADAGGLGQLEIKSMRDAKY 129
           +     ++      +  I G L   NI A  +FSGM+GS+ A    +G++ I  M    Y
Sbjct: 69  SPAGSDLYTSLDRWLNRIPGGLILSNIGACAIFSGMTGSSPATCAAIGKMGIPEMMRRGY 128

Query: 130 HDDFAGGLTAASCIIGPLVPPSVPLVIYGVVSNTSIGALFLAGAIPGLLCCIALMVMSYF 189
               A G  AA   +G L+PPSV L++YG+ + TSIG LF+AG +PG+L  I  M  +  
Sbjct: 129 PASVASGSIAAGGTLGILIPPSVTLIVYGIATETSIGRLFMAGILPGILLTIMFMTWAVI 188

Query: 190 ICKKRGY---MTLPKASRREQFKSLKEAFLSLLTPVIIIGGIFSGKFTPTEAAAVSSLYA 246
            CK++GY     L + S +E+   L      LL     +  ++ G  TP+EAA   +   
Sbjct: 189 DCKRKGYEFEARLVRYSMKERLAVLPRILPFLLIIAGTLYVLYGGIATPSEAAGAGAFLT 248

Query: 247 LFLGTVVYNTLTLQGFIEILKETVNTTAVVALMVMGVTVFGWIVAREQLPQMLADYFLTI 306
           L +  V Y     +    I    +  + ++ +++    +F + ++   + Q +A     +
Sbjct: 249 LAVVIVAYRLFRFRPVAGIFGSAMKESVMIMMIMAAAELFAFALSSLFITQTVAAAIADM 308

Query: 307 SDNPLVLLLLINLLLLFLGTFIESLALLLLLVPFLVPVASAVGIDPVHFGVMAILNLMIG 366
             N  VL+ +IN+ LL  G F+  +A++++  P L P+ +  G DP  F ++  +N+ +G
Sbjct: 309 EVNRWVLMAVINVFLLICGMFLPPVAVIVMTSPMLFPIVTQAGFDPYWFAIVLTINMEVG 368

Query: 367 ILTPPMGMALYVVSRVG-DIPFHTLTRGVLPLLVPLFIVLALVAVFPQFTLLLPELFLG 424
           ++TPP+G+ L+V++ +   IP   +  G LP ++ +F+ + L+ VFP     LP   LG
Sbjct: 369 LITPPIGLNLFVINAIAPQIPTKDILWGSLPYVLVMFLAIILLCVFPDVATWLPNQMLG 427