Pairwise Alignments

Query, 427 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 437 a.a., large C4-dicarboxylate uptake permease, DedA family protein from Sinorhizobium meliloti 1021

 Score =  310 bits (793), Expect = 7e-89
 Identities = 173/418 (41%), Positives = 250/418 (59%), Gaps = 5/418 (1%)

Query: 11  LLFAGMPVGFSLIFVALAFLILTNSTGINFA--AQQMLGGIDNFTLLAVPFFVLTGHLMN 68
           L     P+ +++   A AF ++ N   I  A  AQ+M  G  + +LLA+P FVL G +MN
Sbjct: 16  LFLLSTPITWAMAIGAFAFFLI-NMDMIPLANFAQEMAEGSQSVSLLALPLFVLAGCIMN 74

Query: 69  SAGITERIFNFAKSLVGHITGSLGHVNIMASLLFSGMSGSALADAGGLGQLEIKSMRDAK 128
           ++GIT R+   A  LVGH+TG+L  +  +   L  G++ SA ADA  L +     M    
Sbjct: 75  ASGITRRLLALADVLVGHMTGALAQMCTVLGTLLGGLTASANADAAMLAKTLGVEMSQRG 134

Query: 129 YHDDFAGGLTAASCIIGPLVPPSVPLVIYGVVSNTSIGALFLAGAIPGLLCCIALMVMSY 188
           Y   FA  +T+++ II  L+PPS+ L++YG ++ TSIG LF AG IPGL+    LMV +Y
Sbjct: 135 YSRAFAAVITSSAAIITSLIPPSIGLIVYGFLAETSIGRLFAAGVIPGLVLATGLMVTTY 194

Query: 189 FICKKRGYMTLPK--ASRREQFKSLKEAFLSLLTPVIIIGGIFSGKFTPTEAAAVSSLYA 246
           FI +KRGY  L K  A+R E  ++L +   +L  PV+I  G   G FT TEA AV  +Y 
Sbjct: 195 FIARKRGYKPLRKERATRAEGVRALIDGLWALSIPVVIFAGTRYGLFTTTEAGAVVVVYV 254

Query: 247 LFLGTVVYNTLTLQGFIEILKETVNTTAVVALMVMGVTVFGWIVAREQLPQMLADYFLTI 306
           LF+    Y   T +   E+L E V  +AVV +M+     FG+ +A EQ+PQ ++ +    
Sbjct: 255 LFVAVFGYREFTFRQIPEVLAEAVRDSAVVMIMICAAAAFGFYLAWEQVPQAMSGWLGEA 314

Query: 307 SDNPLVLLLLINLLLLFLGTFIESLALLLLLVPFLVPVASAVGIDPVHFGVMAILNLMIG 366
           +DNPL++LLLIN+LL+ +GT IE  A L++L P L+P+   VGID VHFGV+ I NL I 
Sbjct: 315 TDNPLLMLLLINVLLIVIGTAIEGSAALIILTPMLIPIIDGVGIDRVHFGVVFITNLTIA 374

Query: 367 ILTPPMGMALYVVSRVGDIPFHTLTRGVLPLLVPLFIVLALVAVFPQFTLLLPELFLG 424
            +TPP+G  +Y+ S V  +P     R VLP L  + ++L ++++FPQ +L LP L  G
Sbjct: 375 GITPPVGGLMYISSMVLKVPMMAYAREVLPYLAMMMVILVMLSMFPQLSLWLPNLVYG 432