Pairwise Alignments

Query, 427 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 468 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  368 bits (945), Expect = e-106
 Identities = 197/462 (42%), Positives = 288/462 (62%), Gaps = 45/462 (9%)

Query: 1   MVGSIFGWLGLLFAGMPVGFSLIFVALAFLILTNSTGINFAAQQMLGGIDNFTLLAVPFF 60
           +VGS   +L L+  G+PV  S+   ++ +L+  N      AAQ+M+ G+++F LLAVPFF
Sbjct: 4   LVGS---FLVLMLVGVPVAISMAAASVLYLVSYNVAPDIIAAQRMIAGVESFPLLAVPFF 60

Query: 61  VLTGHLMNSAGITERIFNFAKSLVGHITGSLGHVNIMASLLFSGMSGSALADAGGLGQLE 120
           +L G+LMNSAG+T RI++FA +LVG + G L  VNI+ S++FSGMSG+ALADA G+G +E
Sbjct: 61  ILAGNLMNSAGVTGRIYSFAVALVGWMKGGLAQVNIVGSVIFSGMSGTALADAAGIGTIE 120

Query: 121 IKSMRDAKYHDDFAGGLTAASCIIGPLVPPSVPLVIYGVVSNTSIGALFLAGAIPGLLCC 180
           IK+M+D  Y  D A G+TAAS  +GP+ PPS+P VIYG+++N SIGALF+AG +PG++  
Sbjct: 121 IKAMKDHGYPVDAAVGVTAASATLGPIFPPSLPFVIYGMMANVSIGALFMAGVVPGVVMT 180

Query: 181 IALMVMSYFICKKRGYMT-LPKASRREQFKSLK--------------------------- 212
           + +M+       KRG+ +  P   +R    SL+                           
Sbjct: 181 VLMMLTVAIFAYKRGWGSDTPFEMKRLLAASLEVVVVLAVPLFIYLLMAAGLSMNLAVGI 240

Query: 213 --------------EAFLSLLTPVIIIGGIFSGKFTPTEAAAVSSLYALFLGTVVYNTLT 258
                          A ++L+TP+I+IGG+  G FTPTEAA  + +++LFLG V Y T+T
Sbjct: 241 ALVVLLALDWYFDFSAVMALMTPIILIGGMTMGWFTPTEAAVAAVIWSLFLGLVRYRTMT 300

Query: 259 LQGFIEILKETVNTTAVVALMVMGVTVFGWIVAREQLPQMLADYFLTISDNPLVLLLLIN 318
           +        +T+ TTA V  +V   ++F W++   Q  QML+   LTI+DN  V L+L+N
Sbjct: 301 MSTLARATFDTIETTASVLFIVTAASIFAWLLTVSQAAQMLSGAILTITDNKWVFLILVN 360

Query: 319 LLLLFLGTFIESLALLLLLVPFLVPVASAVGIDPVHFGVMAILNLMIGILTPPMGMALYV 378
           LL+LF+G F++++A + +LVP L+P+ +  GIDPVHFG++  LNLMIG+L PP+GM L+V
Sbjct: 361 LLMLFVGCFLDTIAAITILVPILLPLTAQFGIDPVHFGLIMTLNLMIGLLHPPLGMVLFV 420

Query: 379 VSRVGDIPFHTLTRGVLPLLVPLFIVLALVAVFPQFTLLLPE 420
           +SRV  +     T  +LP LVPLFI L L+   P   L LP+
Sbjct: 421 LSRVAKLSVERTTMAILPWLVPLFIALILITFVPAVVLWLPQ 462