Pairwise Alignments

Query, 427 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., permease from Sinorhizobium meliloti 1021

 Score =  531 bits (1369), Expect = e-155
 Identities = 257/418 (61%), Positives = 330/418 (78%), Gaps = 1/418 (0%)

Query: 7   GWLGLLFAGMPVGFSLIFVALAFLILTNSTGINFAAQQMLGGIDNFTLLAVPFFVLTGHL 66
           GW  LL AGMPVGF+LI  ALA++ L   TG+NFA Q+M+ G+++F LLAVPFF+LT  L
Sbjct: 7   GWFALLIAGMPVGFTLIVAALAYM-LWQGTGLNFAGQRMIAGLNSFPLLAVPFFILTAQL 65

Query: 67  MNSAGITERIFNFAKSLVGHITGSLGHVNIMASLLFSGMSGSALADAGGLGQLEIKSMRD 126
           MN +G+TERIF+FAK+LVGHI G LGHVNIMAS+LFSGMSGSA+ADA GLGQLEIK+MRD
Sbjct: 66  MNLSGVTERIFDFAKALVGHIRGGLGHVNIMASVLFSGMSGSAVADAAGLGQLEIKAMRD 125

Query: 127 AKYHDDFAGGLTAASCIIGPLVPPSVPLVIYGVVSNTSIGALFLAGAIPGLLCCIALMVM 186
           A Y + F+G +TAAS IIGPL+PPS+PLV+YGV++NTSIG LFL G +PGLLC  +LM+M
Sbjct: 126 AGYDEQFSGSITAASAIIGPLIPPSIPLVVYGVIANTSIGGLFLGGIVPGLLCAASLMIM 185

Query: 187 SYFICKKRGYMTLPKASRREQFKSLKEAFLSLLTPVIIIGGIFSGKFTPTEAAAVSSLYA 246
            Y I  +R Y T  +A  R  + +   A L L+TP IIIGGIF+G F+PTEAA V++ YA
Sbjct: 186 VYVIAWRRNYATAQRAGFRRVWSTFWHALLPLITPFIIIGGIFAGVFSPTEAAVVAASYA 245

Query: 247 LFLGTVVYNTLTLQGFIEILKETVNTTAVVALMVMGVTVFGWIVAREQLPQMLADYFLTI 306
           LFLG VVY  +T    + +L+ETV+ TA V L++MGV++FG+++AREQ+PQ +A +FLT 
Sbjct: 246 LFLGVVVYREITFAKLVTVLRETVSHTAAVGLLIMGVSLFGYVIAREQVPQHVATFFLTY 305

Query: 307 SDNPLVLLLLINLLLLFLGTFIESLALLLLLVPFLVPVASAVGIDPVHFGVMAILNLMIG 366
           +++PL  L+L+NL+LL LGTFIE+LA+LLL+VP LVP A   G+DPVHFGVM + NLMIG
Sbjct: 306 AEDPLTFLILVNLMLLALGTFIEALAILLLIVPVLVPTALQFGVDPVHFGVMVVFNLMIG 365

Query: 367 ILTPPMGMALYVVSRVGDIPFHTLTRGVLPLLVPLFIVLALVAVFPQFTLLLPELFLG 424
           ILTPPMG+AL+VVS+V DIPF  L RG+LPLL+PL +VL L+ +FP     +P+  LG
Sbjct: 366 ILTPPMGVALFVVSKVADIPFGVLARGILPLLIPLVVVLVLITIFPALVTFIPDQMLG 423