Pairwise Alignments

Query, 427 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 427 a.a., TRAP dicarboxylate transporter, DctM subunit (NCBI) from Rhodospirillum rubrum S1H

 Score =  308 bits (788), Expect = 3e-88
 Identities = 155/411 (37%), Positives = 251/411 (61%)

Query: 9   LGLLFAGMPVGFSLIFVALAFLILTNSTGINFAAQQMLGGIDNFTLLAVPFFVLTGHLMN 68
           L L+  GMP+  SL    L FL    +  I   A ++  GI+ F ++A+PFF+L G+ + 
Sbjct: 11  LCLMLTGMPISISLGLTVLTFLFTMTTVPIESVALKLFTGIEKFEIMAIPFFILAGNFLT 70

Query: 69  SAGITERIFNFAKSLVGHITGSLGHVNIMASLLFSGMSGSALADAGGLGQLEIKSMRDAK 128
             G+ +R+ NFA ++VGH  G LG   ++A  LF+ +SGS+ A    +G + + +M    
Sbjct: 71  HGGVAKRMINFATAMVGHWYGGLGLGGVVACALFAAISGSSPATVVAIGSILLPAMVKQG 130

Query: 129 YHDDFAGGLTAASCIIGPLVPPSVPLVIYGVVSNTSIGALFLAGAIPGLLCCIALMVMSY 188
           +   F  G+   S  +G L+PPS+ +V+Y V +NTS+GALF+AG +PGL+    L V + 
Sbjct: 131 FPRRFGAGVITTSGALGILIPPSLVMVMYAVATNTSVGALFMAGVVPGLVLATLLGVTTS 190

Query: 189 FICKKRGYMTLPKASRREQFKSLKEAFLSLLTPVIIIGGIFSGKFTPTEAAAVSSLYALF 248
            I +K  Y  LPKAS   + K+ +EA   L+  VI+IGGI+SG FTPTEAAA+S++YA  
Sbjct: 191 VIARKNNYPRLPKASWATRAKAFREAIWGLMLVVIVIGGIYSGIFTPTEAAAMSAVYAFL 250

Query: 249 LGTVVYNTLTLQGFIEILKETVNTTAVVALMVMGVTVFGWIVAREQLPQMLADYFLTISD 308
           +   VY  + L+G ++IL  + + +A++  ++    +F +++A E +PQ +AD+ +    
Sbjct: 251 IAVFVYKDMPLRGVVKILLSSASMSAMLLYIITNAVLFSFVLANENIPQAIADWIVGKEL 310

Query: 309 NPLVLLLLINLLLLFLGTFIESLALLLLLVPFLVPVASAVGIDPVHFGVMAILNLMIGIL 368
             +  LL++N+LLL  G F+E  +++L++ P L PVA  +GIDPVHFG++ I+N+ +G+ 
Sbjct: 311 GIVAFLLVVNVLLLAAGNFMEPSSIVLIMAPILFPVAMKLGIDPVHFGILIIVNMEVGMC 370

Query: 369 TPPMGMALYVVSRVGDIPFHTLTRGVLPLLVPLFIVLALVAVFPQFTLLLP 419
            PP+G+ LYV S +  +    LT  V+P L+ +   L +V  +P  +L LP
Sbjct: 371 HPPVGLNLYVASGITKMGISELTVAVMPWLLTMLGFLIVVTYWPGLSLWLP 421