Pairwise Alignments

Query, 427 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., TRAP transporter, DctM subunit from Dechlorosoma suillum PS

 Score =  256 bits (655), Expect = 7e-73
 Identities = 154/422 (36%), Positives = 233/422 (55%), Gaps = 6/422 (1%)

Query: 8   WLGLLFAGMPVGFSLIFVALAFLILTNSTGINFAAQQMLGGIDNFTLLAVPFFVLTGHLM 67
           +  L+  G+P+G ++    LA ++     G+      +  GI  + LLA+P FVL G + 
Sbjct: 9   FFALMLLGVPLGTAMGLAGLA-VVFFGDLGLMSLPTSVYTGIAKYPLLAIPVFVLAGMIF 67

Query: 68  NSAGITERIFNFAKSLVGHITGSLGHVNIMASLLFSGMSGSALADAGGLGQLEIKSMRDA 127
             +G+  R+  FA +LVG   G L    I+  ++  G+SGS  ADA  +  + I SM  A
Sbjct: 68  ERSGVALRLVRFAVALVGQRRGGLALAAILVCMVLGGISGSGPADAAAVATVMIPSMARA 127

Query: 128 KYHDDFAGGLTAASCIIGPLVPPSVPLVIYGV-VSNTSIGALFLAGAIPGLLCCIALMVM 186
            Y   F+  + AA+     L+PPS+  ++Y V V   S+ ALF AG IPGLL  +ALM+ 
Sbjct: 128 GYPAAFSASVIAAAGSTAILIPPSIVFILYSVLVPQASVPALFAAGLIPGLLAGLALMLP 187

Query: 187 SYFICKKRGYMT--LPKASRREQFKS-LKEAFLSLLTPVIIIGGIFSGKFTPTEAAAVSS 243
           ++++  + G+    L     R+ F S LKEA   LL PVII+GG+ SG FTPTEAA V+ 
Sbjct: 188 AWWLSVRHGFGVAGLQDGEARQSFWSALKEASWGLLAPVIILGGMRSGAFTPTEAAVVAV 247

Query: 244 LYALFLGTVVYNTLTLQGFIEILKETVNTTAVVALMVMGVTVFGWIVAREQLPQMLADYF 303
            Y LF+G V+Y TL  +   E+L E+   +AVV L++   +VF W  +     + L  + 
Sbjct: 248 FYGLFVGLVIYRTLNWKNIYEVLVESAEVSAVVMLIIALASVFAWAGSTLGTFEALGGWL 307

Query: 304 LTISDNPLVLLLLINLLLLFLGTFIESLALLLLLVPFLVPVASAVGIDPVHFGVMAILNL 363
           + +S N   +LL + LLLL  G F++++++L + +PFL+PV    G DPV FGV+  +N+
Sbjct: 308 VGLSGNETAILLAVTLLLLIAGMFLDAVSILFIFMPFLLPVILHFGWDPVWFGVILTMNV 367

Query: 364 MIGILTPPMGMALYVVSRVGDIPFHTLTRGVLPLLVPLFIVLALVAVFPQFTLLLPELFL 423
            IG  TPPM + L V SR+  I        VL ++  +   L LV   P+    +P  +L
Sbjct: 368 AIGQFTPPMAINLMVTSRIAGIRIEDTVPWVLWMVGAMLSALLLVTFVPELATGIPR-YL 426

Query: 424 GY 425
           GY
Sbjct: 427 GY 428