Pairwise Alignments

Query, 427 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 428 a.a., C4-dicarboxylate TRAP transporter large permease protein DctM from Enterobacter sp. TBS_079

 Score =  293 bits (749), Expect = 9e-84
 Identities = 158/413 (38%), Positives = 242/413 (58%), Gaps = 3/413 (0%)

Query: 11  LLFAGMPVGFSLIFVALAFLILTNSTGINFAAQQMLGGIDNFTLLAVPFFVLTGHLMNSA 70
           LL  GMPV F++   A+A  +  +   +     Q+  G++ FTLLA+PFF+L G +M   
Sbjct: 13  LLALGMPVAFAVGLSAVAGALWIDLP-LEALMIQITSGVNKFTLLAIPFFILAGAIMAEG 71

Query: 71  GITERIFNFAKSLVGHITGSLGHVNIMASLLFSGMSGSALADAGGLGQLEIKSMRDAKYH 130
           GI  R+ NFA   VG I G L  VNI+AS  F  +SGS++AD   +G + I  M    Y 
Sbjct: 72  GIARRLVNFAYVFVGFIRGGLSLVNIVASTFFGAISGSSVADTASIGSVMIPEMEKKGYP 131

Query: 131 DDFAGGLTAASCIIGPLVPPSVPLVIYGVVSN--TSIGALFLAGAIPGLLCCIALMVMSY 188
            D+A  +TA+  +   L+PPS   VIY + +    SI  LF+AG +PGLL  ++LM M  
Sbjct: 132 RDYAAAVTASGSVQAILIPPSHNSVIYSLAAGGTVSIATLFIAGVLPGLLLGVSLMAMCL 191

Query: 189 FICKKRGYMTLPKASRREQFKSLKEAFLSLLTPVIIIGGIFSGKFTPTEAAAVSSLYALF 248
              +KRGY    K   ++  K   +A   L+T VII+GGI SG FT TE+AAV+ L+A F
Sbjct: 192 GFARKRGYPKGEKIPFKQALKITLDALWGLMTVVIILGGILSGIFTATESAAVACLWAFF 251

Query: 249 LGTVVYNTLTLQGFIEILKETVNTTAVVALMVMGVTVFGWIVAREQLPQMLADYFLTISD 308
           +   +Y         +++  TV T  +V +++     FG ++   QLP  + ++F ++SD
Sbjct: 252 VTMFIYRDYKWNELPKLMCRTVKTVTIVMILIGFAAAFGAVMTYMQLPSRITEFFTSLSD 311

Query: 309 NPLVLLLLINLLLLFLGTFIESLALLLLLVPFLVPVASAVGIDPVHFGVMAILNLMIGIL 368
           N  V+L+ +N++LL +GT ++   ++L+L P L+PV +++GIDPVHFG++ ++NL IG++
Sbjct: 312 NKYVILMYLNIMLLLIGTLMDMAPIILILTPVLLPVTNSLGIDPVHFGMIMMVNLGIGLI 371

Query: 369 TPPMGMALYVVSRVGDIPFHTLTRGVLPLLVPLFIVLALVAVFPQFTLLLPEL 421
           TPP+G  L+V S V       + R +LP    L +VLA+V   P  +L LP +
Sbjct: 372 TPPVGSVLFVASAVSKQKIEHVVRAMLPFYGMLLVVLAMVTYIPAISLWLPRV 424