Pairwise Alignments

Query, 427 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., DedA family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  297 bits (761), Expect = 4e-85
 Identities = 168/414 (40%), Positives = 245/414 (59%), Gaps = 8/414 (1%)

Query: 5   IFGWLGLLFA-GMPVGFSLIFVALAFLILTNSTGINFAAQQMLGGIDNFTLLAVPFFVLT 63
           +FG LGLLFA   P+  ++   A A L++        A Q++  G D+F LLAVP F+  
Sbjct: 6   LFGMLGLLFACNAPIMLAVGASAFAALLIKGGMDPMVAVQRLYAGADSFPLLAVPLFMTA 65

Query: 64  GHLMNSAGITERIFNFAKSLVGHITGSLGHVNIMASLLFSGMSGSALADAGGLGQLEIKS 123
           G LM++ GI++RI   A +LVGH+ G L  V++++S+ F+G+SGSA AD   +G + I S
Sbjct: 66  GQLMSAGGISQRIVRLADTLVGHLPGGLAVVSVVSSMFFAGVSGSAAADTAAVGSILIPS 125

Query: 124 MRDAKYHDDFAGGLTAASCIIGPLVPPSVPLVIYGVVSNTSIGALFLAGAIPGLLCCIAL 183
           M    Y   FAG + AA+  IG ++PPS+P++++G ++  SIG LF  G +PGLL  I L
Sbjct: 126 MVARGYSPAFAGAVQAAAGSIGVVIPPSIPMIVFGALTGASIGKLFAGGVMPGLLMGITL 185

Query: 184 MVMSYFICKKRGYMTLPKASRREQ---FKSLKEAFLSLLTPVIIIGGIFSGKFTPTEAAA 240
                  C   G  +  +  R E    + +L  A  SL  P II+GGI SG  T TEAAA
Sbjct: 186 SAW----CVHEGLRSGRETRRFEPAAVWPALLRAGWSLGAPAIILGGIISGVCTATEAAA 241

Query: 241 VSSLYALFLGTVVYNTLTLQGFIEILKETVNTTAVVALMVMGVTVFGWIVAREQLPQMLA 300
           V+ +YA  +G   +  L L+    +L +   T+ VV  ++   ++FGW++A E++P  LA
Sbjct: 242 VAVVYAFLVGLFAHRELDLRRLPALLLDAAVTSGVVMSIIAAASLFGWVMAIERIPAALA 301

Query: 301 DYFLTISDNPLVLLLLINLLLLFLGTFIESLALLLLLVPFLVPVASAVGIDPVHFGVMAI 360
           D  L +     +LLL +N+LLL  GT +E+ A L+LLVP LV +   +GID +H GV+ +
Sbjct: 302 DAILAVGGEGWMLLLAVNILLLLAGTMLETTAALILLVPVLVQLLPRMGIDLIHLGVIVV 361

Query: 361 LNLMIGILTPPMGMALYVVSRVGDIPFHTLTRGVLPLLVPLFIVLALVAVFPQF 414
           +NL IG+LTPP+G+ L V   +  +P  TL R VLPLL  L + L LV   P F
Sbjct: 362 MNLSIGMLTPPLGVCLMVSCGIARVPLATLARAVLPLLAVLVVDLMLVTYIPWF 415