Pairwise Alignments

Query, 427 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 591 a.a., TRAP dicarboxylate transporter family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  302 bits (773), Expect = 2e-86
 Identities = 154/418 (36%), Positives = 250/418 (59%), Gaps = 2/418 (0%)

Query: 5   IFGWLGLLFA-GMPVGFSLIFVALAFLILTNSTGINFAAQQMLGGIDNFTLLAVPFFVLT 63
           +FG+  +  A G+P+   L   ALA +I   +  I + AQ     ID+F ++A+PFF+  
Sbjct: 174 LFGYFAIFLAVGVPIAIGLGLAALATIIAAGTLPIEYIAQVAFTSIDSFPIMAIPFFIAA 233

Query: 64  GHLMNSAGITERIFNFAKSLVGHITGSLGHVNIMASLLFSGMSGSALADAGGLGQLEIKS 123
           G  M + G++ R+   A  ++G + G +    I   + F+ +SGS  A    +G L I +
Sbjct: 234 GVFMGAGGLSRRLLTLADEMLGSLHGGMALATIGTCMFFAAISGSGPATVAAIGSLTIPA 293

Query: 124 MRDAKYHDDFAGGLTAASCIIGPLVPPSVPLVIYGVVSNTSIGALFLAGAIPGLLCCIAL 183
           M +  Y   F+  + AA+  IG ++PPS P V+YGV +  SIG LFL G +PG+L  +AL
Sbjct: 294 MVERGYDKYFSAAVVAAAGAIGVMIPPSNPFVVYGVSAQVSIGKLFLGGIVPGVLTGLAL 353

Query: 184 MVMSYFICKKRGYMTLPKASRREQF-KSLKEAFLSLLTPVIIIGGIFSGKFTPTEAAAVS 242
           MV SY+  KKRG+    +      F ++L +A  +L+ PVI++GGI+ G  TPTEAAA++
Sbjct: 354 MVYSYWYSKKRGWKGEVRVRNLRTFTRALWDAKWALMVPVIVLGGIYGGIMTPTEAAALA 413

Query: 243 SLYALFLGTVVYNTLTLQGFIEILKETVNTTAVVALMVMGVTVFGWIVAREQLPQMLADY 302
           + Y LF+G  ++  L      + + E   T+AVV +++   T+FG I+  E++P  +A  
Sbjct: 414 AFYGLFVGCFIHRELNCGSLYDCIVEAAGTSAVVIVLMAMATIFGNIMTIEEVPTAIATA 473

Query: 303 FLTISDNPLVLLLLINLLLLFLGTFIESLALLLLLVPFLVPVASAVGIDPVHFGVMAILN 362
            L +++N + +L+LIN+LL+ +GTF+E+LA +++L P L+P+   VG+DPVHFGV+ ++N
Sbjct: 474 MLNLTENKIAILMLINVLLIVIGTFMEALAAIVILTPILLPIVLKVGVDPVHFGVIMVVN 533

Query: 363 LMIGILTPPMGMALYVVSRVGDIPFHTLTRGVLPLLVPLFIVLALVAVFPQFTLLLPE 420
           L IG + PP+G+ L+V S V       L++ V+PL+  +  VL L+   P   + L E
Sbjct: 534 LAIGFVPPPVGVNLFVASGVAHAKIEHLSKVVMPLIAIMIGVLLLITYVPALPMFLAE 591