Pairwise Alignments

Query, 298 a.a., N-acetylneuraminate lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., dihydrodipicolinate synthase (RefSeq) from Shewanella amazonensis SB2B

 Score = 70.9 bits (172), Expect = 3e-17
 Identities = 70/292 (23%), Positives = 114/292 (39%), Gaps = 4/292 (1%)

Query: 4   LTGLIAAPHTPFTKDNKVNFAAIDQIAELLIEQGVKGAYVCGTTGEGIHCSVEERKAIAE 63
           + G I A  TP   D  V+FA+++ + E  I  G       GTTGE     ++E   +  
Sbjct: 2   INGSIVALITPMNSDGSVDFASLESLVEFHIANGTDAIVAVGTTGESATLPMKEHINVVA 61

Query: 64  RWVKAVDGKLDVILHTGALSIVDTINLTEHAETLDIFATSAIGPCFFKPGSVDDLVEYCA 123
           + V+   G++ VI   GA +  + I LT+      + A   + P + KP +   LV +  
Sbjct: 62  KTVEFAKGRIPVIGGNGANATAEAIELTQALSATGVAAMLGVTPYYNKP-TPKGLVAHYK 120

Query: 124 QVAAAAPSKGFYYYHSGMSGVNLDLEQFLIKGEQRIPNLYGAKFNNADLYEYQRCVRVSN 183
            VAAA       Y   G +   LDL+   +     + N+ G K    D+    R   +  
Sbjct: 121 AVAAATDIPQILYNVPGRTA--LDLKPETVAELCDVANIIGIKEATGDVSRVARLRELCG 178

Query: 184 RKFDIPFGVDEFLPAGLAVGAVGAVGSTYNYAAPLYLKIIEAFNHGKHDEVAALMDKVIA 243
             F +  G D      L  G  G +    N     + K+      G  +   A  + +  
Sbjct: 179 PDFLLYSGDDATAREFLLAGGDGVISVANNIVPAQFKKMCALALAGDIEGSLAADEPMRG 238

Query: 244 IIRVL-VEYGGVAAGKVAMQLHGIDAGDPRLPIRSLNDKQKADVLAKMRDAG 294
           +   L  E   +     A ++  I  G  RLP+  L++     +L  M+ AG
Sbjct: 239 LYSTLFCEANPIPVKWAAHRMGLIKEGFIRLPLTELSESCHGLLLDAMKKAG 290