Pairwise Alignments

Query, 298 a.a., N-acetylneuraminate lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., dihydrodipicolinate synthetase family protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 72.4 bits (176), Expect = 1e-17
 Identities = 65/282 (23%), Positives = 118/282 (41%), Gaps = 5/282 (1%)

Query: 6   GLIAAPHTPFTKDNKVNFAAIDQIAELLIEQGVKGAYVCGTTGEGIHCSVEERKAIAERW 65
           G+  A  T F +D  +NFA+  ++ E LI  G+ G    GT GE    S +E++A  +  
Sbjct: 7   GVYPAISTQFNEDGSINFASNTRMLEQLILDGINGIIALGTIGENASLSADEKRAFLKHT 66

Query: 66  VKAVDGKLDVILHTGALSIVDTINLTEHAETLDIFATSAIGPCFFKPGSVDDLVEYCAQV 125
           V+ V G++ VI      +    I   +  E + +     +    ++    + L  Y  Q+
Sbjct: 67  VETVAGRIPVIAGCTENTAQLAIQYVQDVEAIGVDGVMLLPAVVYRGTDREVLTHY--QM 124

Query: 126 AAAAPSKGFYYYHSGMS-GVNLDLEQFLIKGEQRIPNLYGAKFNNADLYEYQRCVRVSNR 184
            A A       Y++ +S GV+++L+   I   +  PN+   K +  D             
Sbjct: 125 VARATRLPIMIYNNPVSYGVDINLDMTAILANE--PNIVAIKESTTDTRRLTELQSRFGD 182

Query: 185 KFDIPFGVDEFLPAGLAVGAVGAVGSTYNYAAPLYLKIIEAFNHGKHDEVAALMDKVIAI 244
           +F +  GVD+     L +GA G +    N      + + +    G+ +E   +    + +
Sbjct: 183 RFTLFCGVDDIALESLLLGATGWISGLTNVFPRESVTLYKLARAGRMEEAREIYRWFMPL 242

Query: 245 IRVLVEYGGVAAGKVAMQLHGIDAGDPRLPIRSLNDKQKADV 286
           +R+      V   K A QL G  +   R+P  +L   ++A V
Sbjct: 243 LRLDTIPTLVQCIKFAEQLAGRGSEQVRMPRMTLIGDERAYV 284