Pairwise Alignments

Query, 298 a.a., N-acetylneuraminate lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 290 a.a., dihydrodipicolinate synthase DapA from Phaeobacter inhibens DSM 17395

 Score = 67.0 bits (162), Expect = 5e-16
 Identities = 68/291 (23%), Positives = 117/291 (40%), Gaps = 4/291 (1%)

Query: 6   GLIAAPHTPFTKDNKVNFAAIDQIAELLIEQGVKGAYVCGTTGEGIHCSVEERKAIAERW 65
           G + A  TPF+ + +++   + ++ E  I+QG       GTTGE    + EE + +    
Sbjct: 4   GSMPALVTPFS-NGELDLDTLKRLVEWHIDQGSTALVPVGTTGESPTLTHEEHETVIAEV 62

Query: 66  VKAVDGKLDVILHTGALSIVDTINLTEHAETLDIFATSAIGPCFFKPGSVDDLVEYCAQV 125
           VK   G++ VI   G+ + V+     + A  +   A   + P + KP +   L+ +  ++
Sbjct: 63  VKIAAGRVPVIAGAGSNNTVEGKRFVQFAAEVGADAALVVTPYYNKP-TQRGLIAHFTEL 121

Query: 126 AAAAPSKGFYYYHSGMSGVNLDLEQFLIKGEQRIPNLYGAKFNNADLYEYQRCVRVSNRK 185
              A      Y   G S +  D+    +    ++  + G K    D+    +        
Sbjct: 122 HNCADIPIVIYNIPGRSVI--DMTPATMGELAKLERIIGVKDATGDIARVSQQRASCGAD 179

Query: 186 FDIPFGVDEFLPAGLAVGAVGAVGSTYNYAAPLYLKIIEAFNHGKHDEVAALMDKVIAII 245
           F    G D       A G VG +  T N A  L  +   A   G +       DK++ + 
Sbjct: 180 FIQLSGEDATALGFNAHGGVGCISVTANVAPKLCAEFQAATLAGDYALALEYQDKLMPLH 239

Query: 246 RVLVEYGGVAAGKVAMQLHGIDAGDPRLPIRSLNDKQKADVLAKMRDAGFL 296
             +    G+A  K  +   G+ + + RLP+  L D  KA + A M  AG L
Sbjct: 240 EAIFIEPGLAGAKYGLSKLGLCSEEVRLPLTGLEDSTKAAIDAAMAHAGLL 290