Pairwise Alignments

Query, 298 a.a., N-acetylneuraminate lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., dihydrodipicolinate synthase (RefSeq) from Shewanella loihica PV-4

 Score = 70.5 bits (171), Expect = 5e-17
 Identities = 63/288 (21%), Positives = 119/288 (41%), Gaps = 3/288 (1%)

Query: 6   GLIAAPHTPFTKDNKVNFAAIDQIAELLIEQGVKGAYVCGTTGEGIHCSVEERKAIAERW 65
           G+  A  T F  D  +N+ +  ++ E LI  G+ G    GT GE    S EE++   +  
Sbjct: 7   GVFPAISTQFNDDGSINYESNARMLEDLIRDGIDGVIALGTIGENASLSPEEKREFIKHT 66

Query: 66  VKAVDGKLDVILHTGALSIVDTINLTEHAETLDIFATSAIGPCFFKPGSVDDLVEYCAQV 125
           V+ V+G++ V+      +        +  E L +     + P     G+  +++ +   V
Sbjct: 67  VETVNGRILVLSGCTENTAQQAAKYAQDVEALGVDGLMLL-PAMVYRGTDREVIAHYQHV 125

Query: 126 AAAAPSKGFYYYHSGMSGVNLDLEQFLIKGEQRIPNLYGAKFNNADLYEYQRCVRVSNRK 185
           A +       Y +    GV+++LE   +  E+  PN+   K +  D             +
Sbjct: 126 ARSTKLPIMIYNNPVGYGVDINLEMTAVLAEE--PNIVAIKESTTDTRRLTELQSRFGDR 183

Query: 186 FDIPFGVDEFLPAGLAVGAVGAVGSTYNYAAPLYLKIIEAFNHGKHDEVAALMDKVIAII 245
           F+I  GVD+     + +GA G +    N      + + +    G+ +E   +    + ++
Sbjct: 184 FNILCGVDDIALESILLGATGWISGLTNVFPRESVTLFKLARAGRIEEAREIYRWFMPLL 243

Query: 246 RVLVEYGGVAAGKVAMQLHGIDAGDPRLPIRSLNDKQKADVLAKMRDA 293
           R+      V   K A Q+ G  + + RLP  +L   ++A V   M +A
Sbjct: 244 RLDTIPTLVQCIKFAEQIVGRGSENVRLPRMTLIGDERAYVEKVMAEA 291