Pairwise Alignments

Query, 298 a.a., N-acetylneuraminate lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., dihydrodipicolinate synthase (RefSeq) from Shewanella loihica PV-4

 Score = 82.4 bits (202), Expect = 1e-20
 Identities = 77/296 (26%), Positives = 123/296 (41%), Gaps = 12/296 (4%)

Query: 4   LTGLIAAPHTPFTKDNKVNFAAIDQIAELLIEQGVKGAYVCGTTGEGIHCSVEERKAIAE 63
           + G I A  TP  +D  V++A+++++ E  IEQG       GTTGE     + E   +  
Sbjct: 2   INGSIVALITPMNRDGSVDYASLEKLVEYHIEQGTDAIVAVGTTGESATLPLSEHIEVVA 61

Query: 64  RWVKAVDGKLDVILHTGALSIVDTINLTEHAETLDIFATSAIGPCFFKPGSVDDLVEYCA 123
             VK   G++ VI   GA +  + I LT+    L + A   + P + KP +   LV + +
Sbjct: 62  HTVKFAAGRVPVIGGNGANATAEAIELTKAQANLGVAAMLGVTPYYNKP-TPKGLVAHYS 120

Query: 124 QVAAAAPSKGFYYYHSGMSGVNLDLEQFLIKGEQRIPNLYGAKFNNADLYEYQRCVRVSN 183
            VAAA       Y   G + V  D+    +     +PN+ G K    DL    R   +  
Sbjct: 121 AVAAATDIPQILYNVPGRTSV--DMLPETVAQLVDVPNIIGVKEATGDLSRVARLRELCG 178

Query: 184 RKFDIPFGVDEFLPAGLAVGAVGAVGSTYNYAAPLYLKI-----IEAFNHGKHDEVAALM 238
             F +  G D      L +G  G + S  N   P   K+     ++    G     A + 
Sbjct: 179 DDFMLYSGDDATAREFLTLGGNGVI-SVANNIVPKQFKLMCDAALKGDLEGALKAEAPMK 237

Query: 239 DKVIAIIRVLVEYGGVAAGKVAMQLHGIDAGDPRLPIRSLNDKQKADVLAKMRDAG 294
           D   A+     E   +     A ++  I  G  RLP+  L+++    +L  M++AG
Sbjct: 238 DLFSAL---FCEANPIPVKWAAHRMGLISQGHIRLPLTELSEQYHGLLLEAMKNAG 290