Pairwise Alignments

Query, 298 a.a., N-acetylneuraminate lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 292 a.a., dihydrodipicolinate synthase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 83.2 bits (204), Expect = 7e-21
 Identities = 68/286 (23%), Positives = 123/286 (43%), Gaps = 6/286 (2%)

Query: 6   GLIAAPHTPFTKDNKVNFAAIDQIAELLIEQGVKGAYVCGTTGEGIHCSVEERKAIAERW 65
           G   A  TPF ++ +V+      + E  IEQG+ G   CGTTGE    + +E K +    
Sbjct: 5   GAFTALVTPF-RNGEVDEERYRALVEWQIEQGINGLVPCGTTGESATLTHQEHKDVIRIC 63

Query: 66  VKAVDGKLDVILHTGALSIVDTINLTEHAETLDIFATSAIGPCFFKPGSVDDLVEYCAQV 125
           V+ V G++ V+   G+ +  + + LT +A+         I P + KP + + L ++   +
Sbjct: 64  VEQVKGRVPVLAGAGSNNTREAVELTRYAKQAGADGALLITPYYNKP-TQEGLYQHFKAI 122

Query: 126 AAAAPSKGFYYYHSGMSGVNLDLEQFLIKGEQRIPNLYGAKFNNADLYEYQRCVRVSNRK 185
           AA  P     Y     +G NL   + L + ++ IP + G K    +L +    +      
Sbjct: 123 AAEVPMPFIVYNVPSRTGTNL-CPETLARMKRDIPEVIGVKEATGNLIQVSEIIEYCGAD 181

Query: 186 FDIPFGVDEFLPAGLAVGAVGAVGSTYNYAAPLYLKIIEAFNHGKHDEVAALMDKVIAII 245
           F +  G D  +   LAVG  G +  + N       ++  AF  G       +  ++ +I 
Sbjct: 182 FQVLSGDDFTVLPLLAVGGCGVISVSSNVVPAKMSELCRAFFEGDLATARRVHYEIASIN 241

Query: 246 RVLVEYGGVAAGKVAMQLHG---IDAGDPRLPIRSLNDKQKADVLA 288
           R +         K A+ + G   ++   P +P++  N  +  D+L+
Sbjct: 242 RAMFLETNPIPVKTALSMMGRIELELRLPMVPLQPANQSRLRDILS 287