Pairwise Alignments

Query, 298 a.a., N-acetylneuraminate lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., dihydrodipicolinate synthase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 81.6 bits (200), Expect = 2e-20
 Identities = 69/291 (23%), Positives = 122/291 (41%), Gaps = 4/291 (1%)

Query: 4   LTGLIAAPHTPFTKDNKVNFAAIDQIAELLIEQGVKGAYVCGTTGEGIHCSVEERKAIAE 63
           + G I A  TP   D  V+FA+++++ E  I+QG       GTTGE     + E   +  
Sbjct: 2   INGSIVALITPMNSDGSVDFASLERLVEFHIDQGTDAIVAVGTTGESATLPMNEHVTVVA 61

Query: 64  RWVKAVDGKLDVILHTGALSIVDTINLTEHAETLDIFATSAIGPCFFKPGSVDDLVEYCA 123
           + VK   G++ VI   GA +  + I LT+    + + A   + P + KP +   LV +  
Sbjct: 62  QTVKFAAGRIPVIGGNGANATAEAIELTKSLSKVGVAAMLGVTPYYNKP-TPKGLVAHYK 120

Query: 124 QVAAAAPSKGFYYYHSGMSGVNLDLEQFLIKGEQRIPNLYGAKFNNADLYEYQRCVRVSN 183
            VAA+       Y   G + V  D++   +     + N+ G K    D+   +R   +  
Sbjct: 121 AVAASTDIPQILYNVPGRTAV--DMKPETVAELVSVSNIIGVKEATGDVSRVKRLRELCG 178

Query: 184 RKFDIPFGVDEFLPAGLAVGAVGAVGSTYNYAAPLYLKIIEAFNHGKHDEVAALMDKVIA 243
             F +  G D      L +G  G +    N     +  + +A   G  +  A++ + +  
Sbjct: 179 NDFMLYSGDDATASEFLLLGGNGVISVANNIVPKAFKAMCDAALAGNAELAASIDEPLRG 238

Query: 244 IIRVL-VEYGGVAAGKVAMQLHGIDAGDPRLPIRSLNDKQKADVLAKMRDA 293
           +   L  E   +     A ++  I+ G  RLP+  L+++    +L  M  A
Sbjct: 239 LYSTLFCEANPIPVKWAAHRMGLIECGHIRLPLTELSEQCHGLLLEAMTRA 289