Pairwise Alignments

Query, 298 a.a., N-acetylneuraminate lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 291 a.a., dihydrodipicolinate synthase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 93.2 bits (230), Expect = 6e-24
 Identities = 81/291 (27%), Positives = 121/291 (41%), Gaps = 4/291 (1%)

Query: 6   GLIAAPHTPFTKDNKVNFAAIDQIAELLIEQGVKGAYVCGTTGEGIHCSVEERKAIAERW 65
           G + A  TP  KD  V+FA ++ + E  I +G  G    GTTGE    S EE +A+  + 
Sbjct: 4   GSMPALVTPM-KDGAVDFATLEALVEWQIAEGSHGLVPVGTTGESPTLSHEEHEAVVAKV 62

Query: 66  VKAVDGKLDVILHTGALSIVDTINLTEHAETLDIFATSAIGPCFFKPGSVDDLVEYCAQV 125
           ++   G++ VI   G+ + V+ +    HA+         + P + KP     +  Y A +
Sbjct: 63  IEVAAGRVPVIAGAGSNNTVEAVRFVRHAKDAGADGALVVTPYYNKPTQGGMIAHYTA-L 121

Query: 126 AAAAPSKGFYYYHSGMSGVNLDLEQFLIKGEQRIPNLYGAKFNNADLYEYQRCVRVSNRK 185
           A AA      Y   G S V  D+    +     +P + G K    DL    +       +
Sbjct: 122 AEAADIPIVIYNIPGRSVV--DMTPATMAALAALPTIVGVKDATGDLARVSQTRMACGPE 179

Query: 186 FDIPFGVDEFLPAGLAVGAVGAVGSTYNYAAPLYLKIIEAFNHGKHDEVAALMDKVIAII 245
           F    G D       A G VG +  T N A  L  +  EA   G      AL DK++ + 
Sbjct: 180 FIQLSGEDATALGFNAHGGVGCISVTANVAPALCAQFQEATLAGDFATALALQDKLMPLH 239

Query: 246 RVLVEYGGVAAGKVAMQLHGIDAGDPRLPIRSLNDKQKADVLAKMRDAGFL 296
             +    G+   K A+ L G  + D RLP+  L+D  K  +   M  AG L
Sbjct: 240 EAIFVEPGLVGAKYALSLLGKCSEDVRLPLLGLSDGTKVLIKDAMIHAGIL 290