Pairwise Alignments

Query, 298 a.a., N-acetylneuraminate lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 309 a.a., dihydrodipicolinate synthase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 82.0 bits (201), Expect = 2e-20
 Identities = 74/301 (24%), Positives = 128/301 (42%), Gaps = 16/301 (5%)

Query: 4   LTGLIAAPHTPFTKDNKVNFAAIDQIAELLIEQGVKGAYVCGTTGEGIHCSVEERKAIAE 63
           L+G+I    TP   D+ ++   + ++ E LI  GV   +V GTTGE    S + R  + +
Sbjct: 9   LSGIIPPLVTPLLDDDVLDVEGLQRLIEHLIAGGVHALFVLGTTGESQSLSYKLRMEMIK 68

Query: 64  RWVKAVDGKLDVILHTGALSIVDTINLTEHAETLDIFATSAIGPCFFKPGSVDDLVEYCA 123
              +   G+L V++     SIV+++NL   A      A  +  P +F  G   +L+E+  
Sbjct: 69  NTCRIAKGRLPVLVCISDTSIVESVNLACLAADHGADAVVSAPPYYFATGQ-PELIEFYE 127

Query: 124 QVAAAAPSKGFYYYHSGMSGVNLDLEQFLIKGEQRI---PNLYGAKFNNADLYEYQRCVR 180
            +    P   F Y     + VN     F     QRI   P + G K ++A+   +Q  + 
Sbjct: 128 HLLPQLPLPLFLYNMPTHTKVN-----FAPATIQRIAENPGVIGFKDSSANTVYFQSVMY 182

Query: 181 V--SNRKFDIPFGVDEFLPAGLAVGAVGAVGSTYNYAAPLYLKIIEAFNHGKHDEVAALM 238
               N  F +  G +E +   + +GA G V    N    LY+ +  A  +   +EV  L 
Sbjct: 183 AMKDNPDFSMLVGPEEIMAESVLLGAHGGVNGGANMFPELYVSLYNAAKNADMEEVRRLQ 242

Query: 239 DKVIAIIRVLVEYGGVAAG-----KVAMQLHGIDAGDPRLPIRSLNDKQKADVLAKMRDA 293
           +KV+ I   +   G   +      K A+ L GI +     P      +++  +   +++ 
Sbjct: 243 EKVMQISATIYTVGQHGSSYLKGLKCALSLLGICSDYVAAPFHKFEQRERGKIWKALQNL 302

Query: 294 G 294
           G
Sbjct: 303 G 303