Pairwise Alignments

Query, 278 a.a., MurR/RpiR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 284 a.a., DNA-binding transcriptional regulator HexR (RefSeq) from Shewanella loihica PV-4

 Score = 97.1 bits (240), Expect = 4e-25
 Identities = 73/250 (29%), Positives = 121/250 (48%), Gaps = 6/250 (2%)

Query: 6   NLMVRLRSNTEPLSKKLRVVADYVLENAHEVQYQTITDLAFNTKTSEATVVRLCRDLGYK 65
           N + +++ N    SK  R VA+ +L +     + +I  LA     SE TV R CR L  K
Sbjct: 2   NTLEKVQKNLTHFSKSERKVAEVILASPQTAIHSSIATLAKMADVSEPTVNRFCRRLDTK 61

Query: 66  GYSDFRMALAVDLSQSANQSQPKMDGDICEVSAQSAVD----SLMDTAKL-IDRAALNRI 120
           G+ DF++ LA  L+         ++ D    S  + +     + +DTA+  +D AA+N+ 
Sbjct: 62  GFPDFKLHLAQSLANGTPYVSRHVEEDDSPDSYTTKIFESSMAALDTARQSMDTAAINKA 121

Query: 121 CELVHGAKFIGCVGVGASSIVGRYLAYRLVRIGKKAIMYEDTHLAAMSAGQSVVGDAWFA 180
            +++  AK I   G+GAS+ V      +  R     I ++D  +  MS   S  GD    
Sbjct: 122 VDILTQAKKISFFGLGASASVAHDAQNKFFRFNVPVICFDDVLMQRMSCINSSEGDVVVL 181

Query: 181 ISSSGSTKEVVHAATQAHQRGVPVVSLTNISHSPLSSISDEMLVAARPEGPLTGGAFSSK 240
           IS +G TK ++  A  A + G  V+++T+  +SPLS+     +    PE        +S+
Sbjct: 182 ISHTGRTKSLIDIARLARENGAAVIAITS-RNSPLSAECTLPVTMEVPEDTDMYLPMASR 240

Query: 241 VGALLLVDVL 250
           +  L++VDVL
Sbjct: 241 LAQLVIVDVL 250