Pairwise Alignments

Query, 278 a.a., MurR/RpiR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 284 a.a., transcriptional regulator, RpiR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 93.2 bits (230), Expect = 6e-24
 Identities = 71/250 (28%), Positives = 116/250 (46%), Gaps = 6/250 (2%)

Query: 6   NLMVRLRSNTEPLSKKLRVVADYVLENAHEVQYQTITDLAFNTKTSEATVVRLCRDLGYK 65
           N + +++ +    SK  R VA+ +L +     + +I  LA     SE TV R CR L  K
Sbjct: 2   NTLEKVQKSLTHFSKSERKVAEVILASPQTAIHSSIATLAKMADVSEPTVNRFCRRLDTK 61

Query: 66  GYSDFRMALAVDLSQSANQSQPKMDGDICEVSA-----QSAVDSLMDTAKLIDRAALNRI 120
           G+ DF++ LA  L+         ++ D    S      +S++ SL    + +D AA+N+ 
Sbjct: 62  GFPDFKLHLAQSLANGTPYVSRHVEEDDSPESYTTKIFESSMASLDTARQSLDVAAINKA 121

Query: 121 CELVHGAKFIGCVGVGASSIVGRYLAYRLVRIGKKAIMYEDTHLAAMSAGQSVVGDAWFA 180
            +++  AK I   G+GAS+ V      +  R     I ++D  +  MS   S  GD    
Sbjct: 122 VDILTQAKTISFFGLGASASVAHDAQNKFFRFNVPVICFDDVLMQRMSCINSNEGDVVVL 181

Query: 181 ISSSGSTKEVVHAATQAHQRGVPVVSLTNISHSPLSSISDEMLVAARPEGPLTGGAFSSK 240
           IS +G TK ++  A  A + G  V+ +T   +SPLS      +    PE        +S+
Sbjct: 182 ISHTGRTKSLIEIARLARENGAAVIGIT-ARNSPLSMECTLPVTMEVPEDTDMYLPMASR 240

Query: 241 VGALLLVDVL 250
           +  L+ +DVL
Sbjct: 241 LAQLVTIDVL 250