Pairwise Alignments

Query, 384 a.a., N-acetylneuraminate epimerase from Vibrio cholerae E7946 ATCC 55056

Subject, 385 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score = 58.9 bits (141), Expect = 2e-13
 Identities = 56/227 (24%), Positives = 97/227 (42%), Gaps = 11/227 (4%)

Query: 29  PDLPTGFKDGVGAQVGSKVYVGLGSLGK----SFYVLDLNALSKGWQKIADFT-GAERSG 83
           PDLP G  +G    VG  VY+  G +       F  L+L     GW+K+ +       + 
Sbjct: 155 PDLPNGLSNGALTAVGDVVYLTGGEVENGATDQFLSLNLTKPQDGWKKMINLPHPVSHTV 214

Query: 84  ATASVIGNYIYLFGGSGKAEPSDPSPILFDSVYRYDTKKDSWEKMNTTSPVGLLGASSYS 143
                    I++ GG  K    D S  L+ +V+ Y+  K +W  +  + P  L  AS  +
Sbjct: 215 LLHPETSREIFIIGGR-KRNQGDTS-TLYKNVFTYNIDKQTW-TIKESLPYALSAASGVA 271

Query: 144 PDNRQILF-FGGYNKAYFDRYLRDISTTDKQVNPEVWQRIVDDYMGMTPTDYKWNRNVIS 202
             N Q LF F G     F +  + I+  D++ +P   + +    + +      ++++V+ 
Sbjct: 272 --NAQDLFIFSGDQGETFHQAEKLIAGIDREKDPVKKESLNQQKIKLQSNHPGFSKSVLK 329

Query: 203 YLPEKQEWRDLGVSTYLPNCGSATVIEGNKVTLISGEIKPGLRTAEV 249
           Y  ++  W  L          +  V+ G +V +  GEIK G+RT  +
Sbjct: 330 YDLKQNTWLSLNGLLPYGTVTTNAVLLGQEVIIPGGEIKAGVRTPNI 376



 Score = 51.6 bits (122), Expect = 4e-11
 Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 15/152 (9%)

Query: 235 LISGEIKPGLRTAEVKQYEFGMDQPWKSLLPLPAPQTSNIQEGVAGAFSGKTNGVVVVAG 294
           L++  I P L      Q+ +  +  W     +P         G+AGA SG +  ++++AG
Sbjct: 11  LLTSIISPELSA----QHHYVKNIGWNIAAKIPPAPKQTTAMGLAGAISGTSQNMLLIAG 66

Query: 295 GANFHGAKQAFENGKMFAHEG--LPKAFNSEIYV--EKEGIWSTVNSLPEGLAYGASFTT 350
           G NF   +  +  GK   ++   L +  NS + +   K+ +      LP  LAY A  +T
Sbjct: 67  GTNFPN-EMPWNGGKKKYYDDVFLYRKANSNLRLMPAKKDL-----KLPFNLAYSAVCST 120

Query: 351 SEGVLIVGGEKSGKEMSHKVYMLAWNGSTVEV 382
             G+++ GGE     +S KV +L W  + +++
Sbjct: 121 PHGIVVAGGENE-NGLSKKVLILNWKANELQI 151