Pairwise Alignments

Query, 286 a.a., YafY family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 290 a.a., hypothetical protein from Pseudomonas stutzeri RCH2

 Score =  276 bits (707), Expect = 3e-79
 Identities = 138/275 (50%), Positives = 183/275 (66%)

Query: 6   IRWDLLFRYRMIEIIALWEGRLTTNHLIQSFGIGRQQASKDINTYLADIAPGNLVYDKHL 65
           IRWDL  RYR+IE IA WEGRLTT HL+QSFGI RQQASKDINTYL + AP NL YD+HL
Sbjct: 10  IRWDLALRYRLIETIAWWEGRLTTGHLMQSFGISRQQASKDINTYLNEHAPKNLTYDRHL 69

Query: 66  KGYKPSDSFSPKLTSGHADEYLHILSRSEDMTVTFNELDMGFEHSTMVRPVTRNISPQVL 125
           KGYKP+  F P    G A  YLH+L ++         L + + H+ +++   R+I P+VL
Sbjct: 70  KGYKPTKVFQPLFIDGSASAYLHLLDQNRVRAPHIEGLALAYAHTEVLQVPDRSIRPEVL 129

Query: 126 RPLVQAIREKKRVDICYTSLKDGEQSERIISPHTLVCTPLRWHVRAYCEQAGGYRDFVLS 185
           RP++QA RE  R++  Y SL + E   R+++PHTLV T +RWHVRAYCE+   YRDFVLS
Sbjct: 130 RPILQACREGLRLESEYVSLANPEVEIRVMAPHTLVFTGMRWHVRAYCEKNREYRDFVLS 189

Query: 186 RIQGIPDINNNAIHGKRDDVLWNTKVNVELIPDLRLNEKQRAVIEKDYAMSDGVLRIATN 245
           R +G PD+ + + H +  D  WNT V V + PD RL+  Q+A+IE D+ M DG L + T 
Sbjct: 190 RFRGEPDLMDASDHTREQDDAWNTPVTVLIEPDARLSPAQKAIIEVDFGMLDGHLPVETR 249

Query: 246 ASLVRYVLDTYNIDIHVQKSNPQGQQIVLGNRDEL 280
            +LV+YVL  + ID +  ++N   QQ+ +GN   L
Sbjct: 250 GALVQYVLQRFGIDPNTVQANAAAQQLQVGNLQAL 284