Pairwise Alignments

Query, 286 a.a., YafY family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 290 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 96.3 bits (238), Expect = 7e-25
 Identities = 76/273 (27%), Positives = 126/273 (46%), Gaps = 15/273 (5%)

Query: 13  RYRMIEIIALWEGRLTTNHLIQSFGIGRQQASKDINTYLADIAPGNLVYDKHLKGYKPSD 72
           R   I+    + G ++   LI  F  G   A++D   Y  ++AP N+      K Y    
Sbjct: 13  RLAFIDFSLQYFGEISRQDLISRFATGLAAATRDFAMY-RELAPDNMQLVHQTKRYHRQP 71

Query: 73  SFSPKLTSGHADEYLHILSRS--EDMTVTFNELDMGFEHSTMVRPVTRNISPQVLRPLVQ 130
            F+       A   LH L++   + ++   N  ++ F+   ++ P      P+++  +++
Sbjct: 72  GFNALFPHDPA-VILHGLAQGFGDGLSHPKNPSEICFDAVALIHP-----EPEIVAAVMR 125

Query: 131 AIREKKRVDICYTSLKDGEQSERIISPHTLVCTPLRWHVRAYCEQAGGYRDFVLSRIQGI 190
           AI+    + + Y S   GE    I+ PH +V    RWHVRAY      + DFV++RI+ I
Sbjct: 126 AIQANASLKVQYVSTSSGETRREIV-PHAMVNNGQRWHVRAYDRLNQQFTDFVINRIKSI 184

Query: 191 PDINNNAIHGKRD--DVLWNTKVNVELIPDLRLNEKQRAVIEKDYAMSDGVLRIATNASL 248
                  +  +R   D LW  ++ + LIP   L  K    IE DY M +GVL I+  A+L
Sbjct: 185 GGFGEPVVGHERSETDALWQRQLCLTLIPHPSL--KYPEAIELDYGMQNGVLDISCRAAL 242

Query: 249 VRYVLDTYNIDIHVQKSNPQGQ-QIVLGNRDEL 280
             Y+L  +++D   +     G  Q+ L NR+ L
Sbjct: 243 AGYLLRQWSVDCSPRHQISSGVCQLALKNREIL 275