Pairwise Alignments

Query, 286 a.a., YafY family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 290 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score = 84.0 bits (206), Expect = 4e-21
 Identities = 69/269 (25%), Positives = 120/269 (44%), Gaps = 15/269 (5%)

Query: 13  RYRMIEIIALWEGRLTTNHLIQSFGIGRQQASKDINTYLADIAPGNLVYDKHLKGYKPSD 72
           R   I+    + G+++   LI  F  G   A++D ++Y  ++AP N+      K Y    
Sbjct: 14  RLAFIDFSLQYFGQVSRQDLIAKFATGLAAATRDFSSY-RELAPHNMELVHQTKRYHRRA 72

Query: 73  SFSPKLTSGHADEYLHILSRS--EDMTVTFNELDMGFEHSTMVRPVTRNISPQVLRPLVQ 130
            F+P L     +  LH L+    + ++       +  +   ++ P T      ++  +++
Sbjct: 73  EFTP-LFDHDPEAILHGLANGFGDGLSHPVTPSSVCLDAVQLIHPDTN-----IIAAVMR 126

Query: 131 AIREKKRVDICYTSLKDGEQSERIISPHTLVCTPLRWHVRAYCEQAGGYRDFVLSRIQGI 190
           AI  K+ + + Y S+  GE    ++ PHTLV    RWHVR +      + DFV++R + +
Sbjct: 127 AIAHKQAIAVTYVSVSSGETHRELV-PHTLVNNGQRWHVRCFDRTHQVFTDFVVTRFKAV 185

Query: 191 PDINNNAIHG--KRDDVLWNTKVNVELIPDLRLNEKQRAVIEKDYAMSDGVLRIATNASL 248
                       +  D  W   V++ LIP   L   +   I  DY MS+G L I+  A+L
Sbjct: 186 TQSATEPFDHELQEKDGYWQKLVSLVLIPHPSLMHPE--AIALDYQMSEGELVISCRAAL 243

Query: 249 VRYVLDTYNIDIHVQKSNPQGQ-QIVLGN 276
             Y+L  +++D   Q     G  Q+ L N
Sbjct: 244 AGYLLRQWSVDCSAQHQIRSGVCQLALKN 272