Pairwise Alignments

Query, 286 a.a., YafY family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score = 77.8 bits (190), Expect = 3e-19
 Identities = 75/283 (26%), Positives = 128/283 (45%), Gaps = 32/283 (11%)

Query: 13  RYRMIEIIALWEGRLTTNHLIQSFGIGRQQASKDINTYLADIAPGNLVYDKHLKGYKPSD 72
           RYR I+ + L++G+LT   L++ F IG   AS+ I ++L +  P    Y     GY+ + 
Sbjct: 14  RYRFIDFLLLFKGQLTRAELVKRFSIGEATASRTIASFL-EKYPEETEYLGPRYGYRANP 72

Query: 73  SFSPKLTSGHADEYLHILSRSEDMTVTFNELDMGFEHSTMVRPVTRNISPQVLRPLVQAI 132
            +       H  E+  +         T  ++     +  ++    + +    + P+ +AI
Sbjct: 73  FYQ------HKYEHNAVTGLQYTAYGTLTQILDVQRYGIVINKFAKQLDVANVAPVCRAI 126

Query: 133 REKKRVDICYTSLKDGEQSERIISPHTLVCTPLRWHVRAYCEQAGGYRDFVLSRI----Q 188
                + I Y S   G + +R+++PH++      W+ RAY + A  +R F LSR+    Q
Sbjct: 127 VNNASLHIQYASTTSGIK-DRVVTPHSIFEAGGFWYFRAYDKSAYEFRTFKLSRVIKVFQ 185

Query: 189 GIPDINNNAIHGKRDDVLWNTKVNVEL-------IPDLRLNEKQRAVIEKDYAMSDGVLR 241
             PD +N+  + K  D  WN +  VEL       IPD +L+         D  + DG  R
Sbjct: 186 LHPDSSND--YSKARDDSWNRQRMVELMAHPRNPIPDAQLS---------DIGIKDGEHR 234

Query: 242 -IATNASLVRYVLDTYNIDIHV-QKSNPQGQQIVLGNRDELIS 282
            I  + +L+ +VL+   +D     K N     + L NR EL+S
Sbjct: 235 SILVSEALIGFVLNDMRVDCSTSHKLNFIEYPLALKNRTELLS 277