Pairwise Alignments

Query, 793 a.a., SAM-dependent DNA methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 658 a.a., Type I restriction-modification system methyltransferase subunit from Pseudomonas stutzeri RCH2

 Score =  422 bits (1086), Expect = e-122
 Identities = 278/797 (34%), Positives = 421/797 (52%), Gaps = 155/797 (19%)

Query: 1   MDHSVHNKLVSFIWSIADDCLRDVYVRGKYRDVILPMVVLRRLDTLLEPSKEAVLEEVRF 60
           M+   H++  +F+WSIAD  LR  + + +Y  +ILP  +LRR++ +L P+K+ V+++   
Sbjct: 1   MNTENHSQTAAFLWSIAD-LLRGDFKQSQYGRIILPFTLLRRMECVLAPTKDEVIKQTFA 59

Query: 61  QKEEMNEIELDDAPLCATSGYVFYNTSKWTLQTLFSTATNNQQILLANFEDYLNGFSENV 120
           Q+   + +   +  L   +G  F+N S  TL TL  T T       A+   Y+  FS++ 
Sbjct: 60  QEGRPDTVR--EMILLRAAGQQFFNASPLTLGTLSDTQT------AADLMSYVQAFSKDA 111

Query: 121 KEIVECFNLKAQIRHMAGKDVLLDVVEKFVSPYINLTPAVKEDPEGNKLPALSNLGMGYV 180
           +EI E F+ +  ++ +   ++L  VV++F +  ++        PE      +SN GMG +
Sbjct: 112 REIFEHFHFEDFVQQLETANLLYQVVQRFAATDLS--------PE-----RISNFGMGII 158

Query: 181 FEELIRKFNEENNEEAGEHFTPREVIELMTHLVFDPIKDNL-PLSI-TVYDPACGSGGML 238
           FEELIRKF E +NE AGEHFTPR+++ L T LV       L P SI T+YDP  G+GG L
Sbjct: 159 FEELIRKFAESSNETAGEHFTPRDIVHLTTSLVITGQDGKLAPNSIVTIYDPTAGTGGFL 218

Query: 239 TETQNFVEEKYPASNRDIYLYGKEINDETYAICKSDMMIKGNNPENIRVGSTLSTDEFSS 298
           +E   +++    +    + L+G+E+N E+YAICK+DM+IKG +  +I++G+TLS D+ + 
Sbjct: 219 SEGDEYIQSI--SEKVTVSLHGQELNPESYAICKADMLIKGQDVASIKLGNTLSNDQLAD 276

Query: 299 NRFDFMLSNPPYGKSWASEQKHIKE--GKEVVDGRFKVKLKDYWGVESEQEAIPRSSDGQ 356
            RFDFMLSNPP+G  W   QK I +    +  DGRF                +PR SDG 
Sbjct: 277 KRFDFMLSNPPFGVEWKKVQKQITDEHSHKGFDGRFG-------------PGLPRVSDGS 323

Query: 357 LLFLMEMVTKMKSPQDSPLGSRIASVHNGSSLFTGDAGSGESNIRRFIIENDMLDAIVQL 416
           LLFL+ +V+KM+ P+D   GSRI  + NGS LFTG AGSGES IRR++++ND+++AI+ L
Sbjct: 324 LLFLLHLVSKMRDPRDG--GSRIGIILNGSPLFTGGAGSGESEIRRYLLQNDLVEAIIAL 381

Query: 417 PNNLFYNTGITTYIWLLNNNKPENRQGKVQLIDASLLFRKLRKNLGNKNCEFSPEHIAEI 476
           P ++FYNTGI TY+W+L+N+K   RQGKVQLID S  F K+RK+LG+K    + E I E+
Sbjct: 382 PTDMFYNTGIATYVWVLSNHKAAVRQGKVQLIDGSQHFAKMRKSLGSKRQYLTEEQIDEL 441

Query: 477 VSTYLENQSVERAIDEKGDPVGIAAQVFKNQDFGYYKVNIERPDRRNAQFRADLIEPLRF 536
           V  Y   +   +            +++F  + FGY ++ +ERP R N Q   + IE +  
Sbjct: 442 VRLYGRFEETPQ------------SKIFPVEAFGYRRITVERPLRLNFQTSPERIEKVLE 489

Query: 537 ENSQREVMEYLYAEYGEQVYDAGFVKGIEKEITKWCEENDISLNKAAKTKLLDTKNWIKQ 596
           E                        K IEK            L   A+ +L++       
Sbjct: 490 E------------------------KAIEK------------LEAPARQRLIEA------ 507

Query: 597 RTLVNVASQLHKKIGDEVYNDFNQFKQLVDAELTSLGLKLSAPEKKAILDAVSWYDENAE 656
                    L        + +  QF +L+   L +  +  S PE KAIL+A+S  D +A+
Sbjct: 508 ---------LQAMDASAAHRNREQFSKLLKKALNAHDVFPSTPELKAILNALSERDSDAD 558

Query: 657 KVIKKVAKLKQDKLDELLENYECELQDLPDFGYYPTGNHNEFVTYESSSDLRDSESVPLE 716
                                 C ++  P                E+ + LRD+E+VPL 
Sbjct: 559 ---------------------ICMVKGQP----------------EADAGLRDNENVPLG 581

Query: 717 QSIYQYFLDEVKPHVDEAWINLESVK--------IGYEISFNKYFYRHKPLRSMDEVAGD 768
           +S+Y YF  EVKPHV +AWI+             +G+EI FN++FY  +P R ++E+  D
Sbjct: 582 ESVYDYFEREVKPHVPDAWIDESKTDAQDGEVGVVGFEIPFNRHFYVFQPPRLLEEIDRD 641

Query: 769 IIA----LEQKAEGLIA 781
           + A    ++Q  EGL A
Sbjct: 642 LKACTDRIKQMIEGLSA 658