Pairwise Alignments

Query, 793 a.a., SAM-dependent DNA methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 537 a.a., type I restriction-modification system, M subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 73.2 bits (178), Expect = 4e-17
 Identities = 73/319 (22%), Positives = 132/319 (41%), Gaps = 53/319 (16%)

Query: 176 GMGYVFEELIRKFNEENNEEAGEHFTPREVIELMTHLVFDPIKDNLPLSITVYDPACGSG 235
           G+G ++E L+ K   E    AG++FTPR +I+ M  ++      N      + DPA G+ 
Sbjct: 139 GLGDLYEGLLEKNANETKSGAGQYFTPRALIDSMVRVI------NPQAGEVIQDPAAGTA 192

Query: 236 GMLTETQNFVEE---------KYPASNRDIYLYGKEINDETYAICKSDMMIKGNNPEN-- 284
           G L     F++          K     R+    G E+   T  +   + ++ G   ++  
Sbjct: 193 GFLIAAHEFIKNADNYDDLTLKEIEHLRNKAFIGVELVPSTRRLALMNCLLHGMEGDDEG 252

Query: 285 -IRVGSTLSTDEFSSNRFDFMLSNPPYGKSWASEQKHIKEGKEVVDGRFKVKLKDYWGVE 343
            + +G++L     S  + D +L+NPP+G S        K G   +               
Sbjct: 253 VVHLGNSLGQVGMSLPKADIILANPPFGTS--------KGGDASI--------------- 289

Query: 344 SEQEAIPRSSDGQLLFLMEMVTKMKSPQDSPLGSRIASVHNGSSLFTGDAGSGESNIRRF 403
           +  +    +S+ QL FL  +   +K       G R A V   + LF  +AG G +++RR 
Sbjct: 290 TRDDLTYPTSNKQLAFLQHIYRNLKP------GGRAAVVLPDNVLF--EAGVG-TDVRRD 340

Query: 404 IIENDMLDAIVQLPNNLFYNTGITTYIWLLNNNKPENRQGKVQLIDASLLFRKLRKNLGN 463
           ++    L  I++LP  +FY  G+ T +         ++  +      + ++  LR N+ N
Sbjct: 341 LMYKCNLHTILRLPTGIFYAAGVKTNVLFFTKGSEADKLQEENCTTNTWVY-DLRTNMPN 399

Query: 464 --KNCEFSPEHIAEIVSTY 480
             K   F  +H+    + Y
Sbjct: 400 FGKRTPFGEQHLTPFEAVY 418