Pairwise Alignments

Query, 793 a.a., SAM-dependent DNA methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 506 a.a., type I restriction-modification system, M subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  120 bits (301), Expect = 2e-31
 Identities = 124/486 (25%), Positives = 206/486 (42%), Gaps = 72/486 (14%)

Query: 13  IWSIADDCLRDVYVRGKYRDVILPMVVLRRLDTLLEPSKEAVLEEVRFQKEEMNEIELDD 72
           +W+ A D  R V     Y+D +L M+ L+ +  + + + +    E     E + E+  ++
Sbjct: 14  VWN-ACDTFRGVVDASAYKDYVLTMLFLKYISDVWQDNYDTYKAEYGDAPELIEEMMKNE 72

Query: 73  APLCATSGYVFYNTSKWTLQTLFSTATNNQQI--LLANFEDYLNGFSENVKEIVECFNLK 130
             +         + S + L      A N ++I   L   E+   G   +V + +  FN  
Sbjct: 73  RFVLPK------DASFYALYERRFEAGNGERIDKALHAIEEANMGKLNDVFQDIS-FNST 125

Query: 131 AQIRHMAGKDVLLDVVEKFVSPYINLTPAVKEDPEGNKLPALSNLGM-GYVFEELIRKFN 189
                    D+L  ++E F  P +NL P+            + NL + G  +E LI+ F 
Sbjct: 126 KLGDDKQKNDILRHMLEDFSKPELNLRPS-----------RIGNLDIIGNAYEFLIKHFA 174

Query: 190 EENNEEAGEHFTPREVIELMTHLVFDPIKDNLPLSITVYDPACGSGGMLTETQNFVEEKY 249
             + ++AGE +TP EV +L+  LV     D       + DPACGS  +L +    +++++
Sbjct: 175 ASSGKKAGEFYTPPEVSQLIAELVNPQEGDE------ICDPACGSASLLMKCAKLIKDRF 228

Query: 250 PASNRDIYLYGKEINDETYAICKSDMMIKGNNPENIRVGSTLSTD-----EFSSNRFDFM 304
              NR   LYG+E    T+++ K +M +   +   I  G TL        +     FD +
Sbjct: 229 --GNRKYALYGQEAIGSTWSLAKMNMFLHSEDNHRIEWGDTLRNPLLLDGDDHLKHFDIV 286

Query: 305 LSNPPYG-KSWASEQKHIKEGKEVVDGRFKVKLKDYWGVESEQEAIPRSSDGQLLFLMEM 363
           ++NPP+    W  E            GRF+               IP  + G   F++ M
Sbjct: 287 VANPPFSLDKWGHEAAEADRF-----GRFR-------------RGIPPKTKGDYAFILHM 328

Query: 364 VTKMKSPQDSPLGSRIASVHNGSSLFTGDAGSGESNIRRFIIENDMLDAIVQLPNNLFYN 423
           +  +K     P   R+  V     LF     S E  IR+ +I+ ++LD ++ LP  LFY 
Sbjct: 329 IETLK-----PGTGRMGVVVPHGVLFRA---SSEGEIRKQLIKENLLDMVIGLPEKLFYG 380

Query: 424 TGITTYIWLLNNNKPENRQGKVQLIDASLLFRKLRKNLGNKNCEF-SPEHIAEIVSTYLE 482
           TGI   I +   NK +N    V  IDAS      R+    KN  F   E I +++ T   
Sbjct: 381 TGIPAAILVFRKNKKDN---NVLFIDAS------REYQDGKNQNFLRDEDIQKVLDTAKA 431

Query: 483 NQSVER 488
            +SV++
Sbjct: 432 RESVDK 437