Pairwise Alignments

Query, 793 a.a., SAM-dependent DNA methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 517 a.a., Type I restriction enzyme EcoR124II M protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  118 bits (295), Expect = 9e-31
 Identities = 99/352 (28%), Positives = 157/352 (44%), Gaps = 59/352 (16%)

Query: 151 SPYINLTPAVKEDPEGNKLPALSNLGMGY-----------VFEELIRKFNEENNEEAGEH 199
           SP +  T   K     N L AL ++  G             +E +I +F     ++AGE 
Sbjct: 145 SPKLGKTADDKNTLVSNVLLALDDINFGLEASQEIDILGDAYEYMISQFAAGAGKKAGEF 204

Query: 200 FTPREVIELMTHLVFDPIKDNLPLSITVYDPACGSGGMLTETQNFVEEKYPASNRDIYLY 259
           +TP+EV  ++  +V             VYDP CGSG +L    +            + +Y
Sbjct: 205 YTPQEVSRILAEIV----AIGHQRLRNVYDPTCGSGSLLLRAASI--------GNAVDIY 252

Query: 260 GKEINDETYAICKSDMMIKGNNPENIRV--GSTLSTDEFSSNRFDFMLSNPPYGKSWASE 317
           G+E N  TY + + +M++ G    N ++  G TL  D F   +FD +++NPP+   W++ 
Sbjct: 253 GQEKNPTTYNLARMNMLLHGIRFSNFKIENGDTLEWDAFGDTQFDAVVANPPFSAEWSAA 312

Query: 318 QKHIKEGKEVVDGRFKVKLKDYWGVESEQEAIPRSSDGQLLFLMEMVTKMKSPQDSPLGS 377
            K   + +    GR                  PR +     F++ M+  +        G 
Sbjct: 313 DKFNTDDRFSKAGRL----------------APRKT-ADYAFILHMIYHLNE------GG 349

Query: 378 RIASVHNGSSLFTGDAGSGESNIRRFIIE-NDMLDAIVQLPNNLFYNTGITTYIWLLNNN 436
            +A V     LF G+A   E  IRRF+IE  + +DAI+ LP N+FY T I T I +    
Sbjct: 350 TMACVAPHGVLFRGNA---EGVIRRFLIEKKNYVDAIIGLPANIFYGTSIPTCILVFKKC 406

Query: 437 KPENRQGKVQLIDASLLFRKLRKNLGNKNCEFSPEHIAEIVSTYLENQSVER 488
           + E+    +  IDAS  F K++    NK  E   +HI +IV TY + + +E+
Sbjct: 407 RKED--DNILFIDASKEFEKVKTQ--NKLRE---QHIQKIVETYRDRKEIEK 451