Pairwise Alignments

Query, 793 a.a., SAM-dependent DNA methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 472 a.a., Type I restriction enzyme StySJI M protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 85.1 bits (209), Expect = 8e-21
 Identities = 89/367 (24%), Positives = 159/367 (43%), Gaps = 63/367 (17%)

Query: 178 GYVFEELIRKFNEENNEEAGEHFTPREVIELMTHLVFDPIKDNLPLSITVYDPACGSGGM 237
           G ++E ++ K  ++    AG++FTPR +I+ M   +      N  +  TV DPACG+GG 
Sbjct: 131 GAIYESILEKNGQDKKSGAGQYFTPRPLIQAMVDCI------NPQMGETVCDPACGTGGF 184

Query: 238 LTETQNFVEEKYPASN-----RDIYLYGKEINDETYAICKSDMMIKGNNPENIRVGSTLS 292
           L    ++++ +  +       RD  L+G +       +   ++ + G   +   +    S
Sbjct: 185 LLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDS 244

Query: 293 TDEFSSNRFDFMLSNPPYGKSWASEQKHIKEGKEVVDGRFKVKLKDYWGVESEQEAIPRS 352
            ++  S   D +L+NPP+G   A              G   +   D++ VE++       
Sbjct: 245 LEKEPSTLVDVILANPPFGTRPA--------------GSVDINRPDFY-VETK------- 282

Query: 353 SDGQLLFLMEMVTKMKSPQDSPLGSRIASVHNGSSLFTGDAGSGESNIRRFIIENDMLDA 412
            + QL FL  M+  +K+      G R A V   + LF  +AG+GE+ IR+ ++++  L  
Sbjct: 283 -NNQLNFLQHMMLMLKT------GGRAAVVLPDNVLF--EAGAGET-IRKRLLQDFNLHT 332

Query: 413 IVQLPNNLFYNTGITTYIWLLNNNKPENRQGKVQLIDASLLFRKLRKNLGNKNCEFSPEH 472
           I++LP  +FY  G+   +   +  +P     ++   D       ++  L     E    H
Sbjct: 333 ILRLPTGIFYAQGVKANVLFFSKGQPTK---EIWFYDYR---TDIKHTLATNKLE--RHH 384

Query: 473 IAEIVSTYLENQSVERAIDEKGDPVG---------IAAQVFKNQDFGYYKVNIERPDRRN 523
           + + VS Y  N  VE   D + +P G         I A+   + D  + K   E  DR  
Sbjct: 385 LDDFVSCY--NNRVE-IYDAENNPQGRWRKYPVDEIIARDKTSLDITWIKPGGEVDDRSL 441

Query: 524 AQFRADL 530
           A+  AD+
Sbjct: 442 AELMADI 448