Pairwise Alignments

Query, 793 a.a., SAM-dependent DNA methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 874 a.a., type I restriction-modification system, M subunit (RefSeq) from Shewanella sp. ANA-3

 Score =  115 bits (289), Expect = 8e-30
 Identities = 96/327 (29%), Positives = 148/327 (45%), Gaps = 51/327 (15%)

Query: 177 MGYVFEELIRKFNEENNEEAGEHFTPREVIELMTHLVFDPIKDNLPLSITVYDPACGSGG 236
           +GY++E LI KF     ++AGE +TP EV  LM+H++   +K     +I +YDP  GSG 
Sbjct: 165 LGYIYEYLIEKFAANAGKKAGEFYTPHEVSVLMSHIIAHELKHK--DTIEIYDPTSGSGS 222

Query: 237 MLTETQNFVEEKYPASNRDIYLYGKEINDETYAICKSDMMIKGNNPENI--RVGSTLSTD 294
           +L      V EKY  S   I  Y +E+   TY + + +++++G    NI  R G TL  D
Sbjct: 223 LLINIGEAV-EKYAKSKDSITYYAQELKANTYNLTRMNLIMRGIKASNIKTRNGDTLEDD 281

Query: 295 -----------EFSSNRFDFMLSNPPYGKSWASEQKHIKEGKEVVDGRFKVKLKDYWGVE 343
                       + +   D ++SNPPY ++W              D  FK     Y    
Sbjct: 282 WPYFDENDPQGTYHALYVDAVVSNPPYSQAW--------------DPSFKDSDPRY---- 323

Query: 344 SEQEAIPRSSDGQLLFLMEMVTKMKSPQDSPLGSRIASVHNGSSLFTGDAGSGESNIRRF 403
             +  +   +     FL+  +  +K     P G     + +G  LF    G  E  IR+ 
Sbjct: 324 -SRFGLAPKTKADFAFLLHDLYHLK-----PDGIMTIVLPHG-VLF---RGGEEGEIRKQ 373

Query: 404 IIENDMLDAIVQLPNNLFYNTGITTYIWLLNNNKP--ENRQGKVQLIDASLLFRKLRKNL 461
           +IE + +DAI+ LP N+F+ TGI T I +L   +   +  Q  V ++DAS  F K     
Sbjct: 374 LIEQNHIDAIIGLPANIFFGTGIPTVILVLKQKRGSIDKPQNDVLIVDASKHFVK----- 428

Query: 462 GNKNCEFSPEHIAEIVSTYLENQSVER 488
             KN +     I  IV   +   S+E+
Sbjct: 429 EGKNNKLQASDIKRIVDAVINRDSIEK 455