Pairwise Alignments

Query, 462 a.a., restriction endonuclease subunit S from Vibrio cholerae E7946 ATCC 55056

Subject, 394 a.a., restriction endonuclease subunit S from Synechocystis sp000284455 PCC 6803

 Score = 47.0 bits (110), Expect = 1e-09
 Identities = 78/382 (20%), Positives = 160/382 (41%), Gaps = 54/382 (14%)

Query: 103 HQGRLLKNGDLLIEKSGGGDKTLVGRVVLFDKQYPAVTSNFVAKMTPKEWVISGFLKYVF 162
           H+  LL + ++++ + G      VG VV  +K   A+ + +   +          L++++
Sbjct: 44  HKAYLLDSPNIIVGRKGS-----VGEVVWANKNCWAIDTTYYVTLKQ-----DNSLRFIY 93

Query: 163 SALYNNGVNYLSIKQTTGIQNLDASSYLNEKFCIPQKEEQYEIAKFLDNKTTQINEAIAI 222
             L +  +  L    +TG+  L+ +     K  +P   EQ +IA+ LD     ++EAIA 
Sbjct: 94  WLLKSFDLRKLD--SSTGVPGLNRNDVYRIKCNLPSLPEQEKIAEILDT----MDEAIAK 147

Query: 223 KQKQIELLKERKQIIIQQAVTQGLNPDATMK-------YSGVDWIGAIPGHWIVK----- 270
            ++ I  LK+ K  ++   +T+G++ +  ++             IG IP  W +K     
Sbjct: 148 TEECIAKLKKIKAGLVHDLLTRGIDENGELRDPVRHPEQFKQSAIGLIPKEWDIKELSQL 207

Query: 271 ----RAKYLLDEINERSETGLE-ELLSVSHMTGVTPRSEKNVTMFMAEDYTGSKLCHS-- 323
               R K+     N+ +  G +   +    +     +  ++ T  + E+  G+K+     
Sbjct: 208 ATVDRGKFTHRPRNDPNFYGGQYPFIQTGDIAQNLGQVIRSYTQTLNEN--GAKVSREFP 265

Query: 324 -GDLVINIMWAWMGALGVSDRTGIVSPSYGVFREQREG-TFVPKYLEMLLKSTKYVEYYN 381
            G + + I      A  ++D   +  P +  F +   G T  P++   L++       + 
Sbjct: 266 VGTIAVTI------AANIADTAILGIPMF--FPDSIVGVTVFPQFNHRLVELCIRFAKHK 317

Query: 382 KVSTGLHSSRLRFYGHMLFDMALGFP--PYEEQTQIVEYISRECSKVDEAITVQAEQVSK 439
             +    S++       L  + + FP  P E+     + +S    K DE +  +   + K
Sbjct: 318 LDAKATQSAQKNINLEDLRPLLIPFPRNPKEQ-----DRMSSVYEKFDERLKKEEAYLEK 372

Query: 440 LKEYKTTLINSAVTGKIKVTEL 461
           LK +K  L++  +TGK++V  L
Sbjct: 373 LKLHKKGLMHDLLTGKVRVNHL 394