Pairwise Alignments

Query, 462 a.a., restriction endonuclease subunit S from Vibrio cholerae E7946 ATCC 55056

Subject, 464 a.a., restriction endonuclease subunit S from Synechocystis sp000284455 PCC 6803

 Score =  117 bits (294), Expect = 6e-31
 Identities = 114/469 (24%), Positives = 199/469 (42%), Gaps = 67/469 (14%)

Query: 24  KMPKYESYKDSCEQWIGDIPAHWEV---YRLKSAVYECSNGIWGSDPNGRDEIVVLRVAD 80
           K+  Y  YKDS   W+G IPAHW++   +   S   E + G+  S            V  
Sbjct: 2   KLKPYPEYKDSGVSWLGQIPAHWDIKPGFAFLSERKEKNTGMKEST-----------VLS 50

Query: 81  FDDHKLKISDEKLTYRSIPAKEHQGRLLKNGDLLIEKSG-GGDKTL--VGRVVLFDKQYP 137
               ++ +   +  +  +P      ++ + G+++I  +    DK    VG+V    +   
Sbjct: 51  LSYGQIVVKPPEKLHGLVPESFETYQIAEPGNIIIRGTDLQNDKVSLRVGKV----RNRG 106

Query: 138 AVTSNFVAKMTPKEWVISGFLKYVFSALYNNGVNYLSIKQTTGI---QNLDASSYLNEKF 194
            +TS ++   T +++         ++ L  +G + + I    G    QNL  S +     
Sbjct: 107 IITSAYLCLETKEKFNPD------YAHLLLHGYDLMKIYYGMGSGLRQNLSFSDFKRLPL 160

Query: 195 CIPQKEEQYEIAKFLDNKTTQINEAIAIKQKQIELLKERKQIIIQQAVTQGLNPDATMKY 254
             P + EQ +I K+L +   QIN+ I  K++ IELLKE+KQ II QAVT+GL+P+  +K 
Sbjct: 161 LAPPESEQSKINKYLQSIQVQINKFIRNKRRLIELLKEQKQNIINQAVTRGLDPNVKLKP 220

Query: 255 SGVDWIGAIPGHWIVKRAKYL--------------------LDEINERSETGLEELLSVS 294
           SGV WIG IP +W   + K +                    L  I +   +GL ++    
Sbjct: 221 SGVKWIGDIPEYWSFLKLKRIACVKTGYAFKSDHYKSVGIPLIRIGDLKHSGLVDIKQAV 280

Query: 295 HMTGVTPRSEKNVTMFMAEDYTGSKLCHSGDLVINIMWAWMGALG--VSDRTGIVSPSYG 352
            +       E ++T F             GDL++ +  A +G +         +++    
Sbjct: 281 KL------QESDLTHFSCFK------IQYGDLLMAMTGATIGKVAKYQHQTEALLNQRVC 328

Query: 353 VFREQREGTFVPKYLEMLLKSTKYVEYYNKVSTGLHSSRLRFYGHMLFDMALGFPPYEEQ 412
            FR      F   YL  +L S  Y++       G   ++       L    +  PP  EQ
Sbjct: 329 SFRSFESKCF-QDYLLFILSSEVYLKQVTIFCYG--GAQPNISDSTLMSFKIPVPPISEQ 385

Query: 413 TQIVEYISRECSKVDEAITVQAEQVSKLKEYKTTLINSAVTGKIKVTEL 461
             I+ Y+  +    D A++    ++  ++EY T L++  VTG++ V ++
Sbjct: 386 QAILSYVQEQTKTTDSAVSRAEREIELIQEYYTRLMSDVVTGQVDVRDI 434