Pairwise Alignments

Query, 462 a.a., restriction endonuclease subunit S from Vibrio cholerae E7946 ATCC 55056

Subject, 437 a.a., restriction endonuclease subunit S from Methanococcus maripaludis JJ

 Score = 48.1 bits (113), Expect = 6e-10
 Identities = 52/207 (25%), Positives = 88/207 (42%), Gaps = 18/207 (8%)

Query: 41  DIPAHWEVYRLKSAVYECSNGIWGSDPNGRD---EIVVLRVADFDDHKL-KISDEKLTYR 96
           +IP  W+V +L+  V     G WG +    D   +  V+R  D  + +   I D  L Y 
Sbjct: 224 EIPKDWKVGKLRDVVDYYIGGGWGKEEKENDFPQDAFVIRGTDIPNARYGGIKDIPLRYH 283

Query: 97  SIPAKEHQGRLLKNGDLLIEKSGGGDKTLVGRVVLF------DKQYPAVTSNFVAKMTPK 150
                 +  R +K  D+++E SGG     VGR ++             + ++F   M  K
Sbjct: 284 K--ESNYASRTIKPFDIVLEVSGGSKGQPVGRSLMILPELLNQLDNKLICASFCKLMRLK 341

Query: 151 EWVISGFLKYVFSALYNNGVNYLSIKQTTGIQNLDASSYLNE-KFCIPQ---KEEQYEIA 206
           + +   ++      LY+     L  +Q+TGI N     +L++    IP    KE+  +I 
Sbjct: 342 DIISPYYVDLFIKDLYSTEKIMLYQQQSTGISNFKFEFFLDDVNVIIPNERIKEQFNDIL 401

Query: 207 KFLDNKTTQ--INEAIAIKQKQIELLK 231
           K + +K  Q  I   I  K++ + L K
Sbjct: 402 KDIYSKIGQNGIQSQILAKKRDLLLPK 428