Pairwise Alignments

Query, 706 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 696 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  649 bits (1675), Expect = 0.0
 Identities = 342/702 (48%), Positives = 491/702 (69%), Gaps = 17/702 (2%)

Query: 5   LNLSSLWPDLSSLNVMPPQTPEQLSALFVVILWGVALFFLIWSVAAFIRARQRVVWLNKS 64
           + LS L PD S L+   PQT   LS+LFV I   V L F+ + +   I    ++ WL K+
Sbjct: 7   IELSWLLPDFSHLS-FHPQTGTALSSLFVAITLTVTLLFIAYLLYKSIDVVLKINWLQKA 65

Query: 65  LDDAEKSTLSGVRNDLI----SRAEQKKDSVGHLWLEFDETLLEVKGADDVVRLHNTFDA 120
           L+  E+  ++  +  L     S+++ K   +G LW+EFDETL+EV+  D +  + NT DA
Sbjct: 66  LEPLERKDVAQKKEVLYQLAKSKSKGKSKGIGFLWMEFDETLVEVRKGDQI-EIRNTLDA 124

Query: 121 DYFFNSSSLAGGSTENRMIAVVPGFLTALGVIGTFVGLQLGLSDLNIAGNVDVNEMKNGV 180
            +FFN+ +LA   TENR+IA VPGFLTALGVIGTF+GLQLGL+DL +   VDV  M++GV
Sbjct: 125 GHFFNTYTLANSVTENRLIAAVPGFLTALGVIGTFMGLQLGLADLKLGAGVDVTTMQDGV 184

Query: 181 AGVINGAKIAFMTSVWGVLLSVAFNFIEKILEQIIRKKIKSLQNRIDRMFPRLSAEYQLQ 240
           AGV+NGAKIAF+TSVWGV LSV FNF EK+ EQ IR KI+ L++++D +FPR+  E QLQ
Sbjct: 185 AGVVNGAKIAFLTSVWGVALSVFFNFFEKLCEQFIRSKIRELEDKVDFLFPRVRPEEQLQ 244

Query: 241 SIANNSQQSRESLQGLAEKIGEKMQESLIQATQGIQQGLESSLEKIMAPAINKLVDETSD 300
            I+ NS +SR  LQGLAEKIGEKMQE+++ ATQGIQ  LESSL KIMAPAINKLVDETS 
Sbjct: 245 IISENSSESRNVLQGLAEKIGEKMQEAMVTATQGIQSSLESSLSKIMAPAINKLVDETSQ 304

Query: 301 GNQKALESVLQSFMEGFGQQGEQQRVAMDSASQNVNKTLESMSVSMAAFVNKLEVQQNAS 360
           GNQKALE +L+SFM+ FGQ G  QR A+D  S  VN+++E+M ++M+ FV +L+  Q  S
Sbjct: 305 GNQKALEGLLESFMDRFGQAGNLQRSALDDVSNKVNQSVEAMQLTMSNFVEQLQKSQAES 364

Query: 361 SEREKELISTISVQVSELVTQGNEQKRVLTEFVEKQVSELGEQLTKRELAASEREQKLAS 420
            +REK LI+ IS QVS+L +Q  +  + LT +VE Q+ ++  Q+  RE A+++R+ +L +
Sbjct: 365 GDREKALIADISHQVSKLSSQSEDIHQKLTSYVENQIGKISSQMQIREEASAKRDSELVN 424

Query: 421 SMESTIKDLVENVSAQSQVLTDFVQNQVVQLTQTFSERDGMASQMEKERNDIFVNQTQAM 480
            +   + +LV N   Q ++LT FV+ Q+  LT++F ERD  ++++E  RN+    QT+A+
Sbjct: 425 VIGQQVNELVNNSRRQGELLTSFVETQLNNLTKSFDERDKRSTELETTRNNKIEKQTEAI 484

Query: 481 KAGTDELLAQVKAATESQQITTNSIIEQGKQLQNSIDSSVSASARATESMQQSANELRVA 540
              ++EL++ V+ +   Q      ++ QG+ LQNS+++SV A+A+AT++M++S+ ELRV+
Sbjct: 485 VKISNELISTVEKSVSEQLAAVKHLVSQGETLQNSVNASVEAAAQATQAMKESSIELRVS 544

Query: 541 ADSMNVFGSNIKDAGNKLSGAVTEAVNSTKDLAEQNHLGAVKVQALREQLLEDTSKFSAI 600
           AD M V  S++ DAGNKLSGA+  AV+ST DLA QN + A +++  RE L++D S+FS +
Sbjct: 545 ADHMRVLSSHVNDAGNKLSGAIKSAVDSTADLANQNQISAQRIENARESLMKDVSRFSEL 604

Query: 601 ADQINNMLISAEQSFSTLRTTQNEFLAEQKGNLNELTSEMKRNVKELTEQMAQLLEDYAE 660
           +DQI  ++ SA  +F+ L++TQ +F+    GNL       K  V+ L+ +M  +LE+Y++
Sbjct: 605 SDQIKALITSASSTFTELKSTQRDFI----GNL-------KEEVESLSRKMTDMLEEYSQ 653

Query: 661 QANGQTAEHLKVWANSSTQYAESMNTAVRAISSVVDEIQDKV 702
           QANGQTAEHLK+W+ S T Y+  MN+AV+A+SSVVDE+Q K+
Sbjct: 654 QANGQTAEHLKIWSQSVTDYSTQMNSAVKALSSVVDEMQVKL 695