Pairwise Alignments

Query, 244 a.a., chemotaxis protein MotB from Vibrio cholerae E7946 ATCC 55056

Subject, 218 a.a., flagellar motor protein MotB from Paraburkholderia graminis OAS925

 Score = 43.9 bits (102), Expect = 3e-09
 Identities = 50/236 (21%), Positives = 97/236 (41%), Gaps = 28/236 (11%)

Query: 4   GVRSHTQNSVDEENPYWVSFSDLMSALLVIFILAAVALIIELTQKTNDVEAGIEELKQAE 63
           G+       V+   P W +F D+MS LL  F+L  VA+I    + +N +E  +++ +   
Sbjct: 3   GMSEDIDGGVEPGTPIWAAFGDMMSVLLGAFMLILVAVIGVQLELSNKLEQEVKQRQVET 62

Query: 64  LARKNIIYDVRDELAKRNVIVEIADNDTVIRIPESTLTFASGKSSIPNDATIQQAVKDIG 123
             RK +   +   LA   V +     +  I I  + L   +     P     +  +K + 
Sbjct: 63  QRRKTLEEALAGPLAAGRVTLV----NGRIGISGNVLFALNSDQLQPQG---RDLLKSLA 115

Query: 124 VVLHSAIQKKDRFQYLDTIFIEGHTDSDSI---HYRGKGNWGLSTDRAISVWNVWQNELS 180
             L + ++  D+      + + G TD   +   + R   NW LS  RA++V         
Sbjct: 116 GPLSAYLRASDQI-----LMVSGFTDDRRLREGNRRFADNWELSAQRALTVTRAL----- 165

Query: 181 LTPKLGDLENAYHAKLFSVSGYAATRRANLHEANQQEKSQNRRIDIRFTVKKPSIA 236
                  +E    A     + + + +  +   A++Q +++NRR++I    + P+ A
Sbjct: 166 -------IEAGVPAPSLFAAAFGSGQPVS-SNADEQGRARNRRVEIAPVPRLPAAA 213